@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu35550: (2016-07-30 )
MTNWKPLVSVITPSYNARDYIEDTVHSVLDQSHPHWEMIIVDDCSTDGTRDILQQYEKIDERIHVVYLEENSGAAVARNKALERAQGRYVAFLDSDDKWKKDKLEKQLEFMMERSCAFSFTGYSLMAQDGTPLDKFIHAPESLTYDDALKNTIIGCLTVMIDREQTGQIQMPNIRTRQDLATWLSLLKKGFTAYGMNECLAEYRLVNNSISSNKWKAAKKTWFVYREIERLHFMKATWCFVQYAKNAVKKRL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UDP_A_4(2Z87)
CHS_ECOLX
[Raw transfer]



UDP_B_8(2Z87)
CHS_ECOLX
[Raw transfer]
56 HHSearch 86.6727%-113 - C1 -3BCV - ? -
1 PsiBlast_PDB 73.0136%-105 - C1 -2Z86 - CHS_ECOLX -
22 PsiBlast_CBE 72.9636%-111 - C1 -2Z86 - CHS_ECOLX -
21 PsiBlast_CBE 72.5836%-105 - C1 -2Z86 - CHS_ECOLX -
23 PsiBlast_CBE 69.9536%-104 - C1 -2Z86 - CHS_ECOLX -
24 PsiBlast_CBE 68.7636% -97 - C1 -2Z87 4.1 CHS_ECOLX
2 PsiBlast_PDB 68.1436%-108 - C1 -2Z87 3.4 CHS_ECOLX
60 HHSearch 66.8218% -2 - C1 -2D7I - GLT10_HUMAN -
46 Fugue 65.6021% 33 - C1 -2Z86 - CHS_ECOLX -
65 HHSearch 62.3912% 18 - C1 -4FIX - GLFT2_MYCTU -
61 HHSearch 61.3221% 8 - C1 -5AJO - GALT2_HUMAN -
6 PsiBlast_PDB 59.5630% -47 - C1 -1H7L - SPSA_BACSU -
45 PsiBlast_CBE 59.3335% -8 - C1 -4D11 - GALT2_HUMAN -
32 PsiBlast_CBE 58.5935% -5 - C1 -4D11 - GALT2_HUMAN -
47 Fugue 58.4818% 4 - C1 -1QG8 - SPSA_BACSU -
28 PsiBlast_CBE 58.4235% 2 - C1 -5FV9 - ? -
4 PsiBlast_PDB 58.1630% -53 - C1 -1QGQ - SPSA_BACSU -
41 PsiBlast_CBE 58.1435% -7 - C1 -4D0T - GALT2_HUMAN -
40 PsiBlast_CBE 58.0135% -5 - C1 -4D0T - GALT2_HUMAN -
44 PsiBlast_CBE 57.7435% -5 - C1 -4D0T - GALT2_HUMAN -