@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu38900: (2016-08-04 )
MNGQTPARHYYKKLVPSLILILNCIQFLSHPTKADPILLAFVFAVYLAFIWIIPYVASTAVSLSIFIGLWLLTDFFWAVSGQEQGAAYFLIVFLMIYAAFRLPSRLSLIFTACLIGGNILLLSSQGGSLNTIISNISIMLGLYVLFSSMRFRREARREAERNHAELAKMHVQLEHAHKELQKAHAELQEASVLSLRYAVLEERTRIARDIHDSIGHELTSVIVQLQSLPYILKSSKEDSEKVIQNVLSVARECLQEVRSVVHQMGRSESMVGLTALRGLIHQVEERSGLHVSLDTAGLSEESWPPNVSETIYRILQEALTNIIRHADASHAAAVISNDKSHLYVTITDDGQFTGSLTYGFGLTGMKERAEKAGGSLTFSAVQPSGLKIELSLPLMTTNKEQKDEQR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_5(3EHF)
DESK_BACSU
[Raw transfer]



ADP_A_3(3EHH)
DESK_BACSU
[Raw transfer]
2 PsiBlast_PDB 75.5432% -3 - C1 -3GIF - DESK_BACSU -
21 PsiBlast_CBE 75.1132% 16 - C1 -3GIE - DESK_BACSU -
32 HHSearch 74.9627% -87 - C1 -3EHH - DESK_BACSU -
5 PsiBlast_PDB 74.1329% -7 - C1 -3EHJ - DESK_BACSU -
3 PsiBlast_PDB 71.1730% 9 - C1 -3EHF 6.8 DESK_BACSU
4 PsiBlast_PDB 70.9529% -16 - C1 -3EHH 5.9 DESK_BACSU
1 PsiBlast_PDB 70.0632% -8 - C1 -3GIG - DESK_BACSU -
37 HHSearch 64.0118% -30 - C1 -4E01 - BCKD_RAT -
23 Fugue 63.6527% -77 - C1 -3EHG - -
33 HHSearch 61.1815% -1 - C1 -4BIX - CPXA_ECOLI -
43 HHSearch 61.1611% -12 - C1 -2Q8G - PDK1_HUMAN -
39 HHSearch 58.1013% 4 - C1 -4U7O - ? -
50 HHSearch 57.8616% -36 - C1 -4R39 - LVHK2_ERYLH -
44 HHSearch 56.0415% 3 - C1 -4GCZ - FIXL_BRADU (first) -
52 HHSearch 55.9229% -20 * C1 *4GT8 - -
34 HHSearch 55.4914% -6 - C1 -4I5S - ? -
38 HHSearch 54.3212% 24 - C1 -2E0A - PDK4_HUMAN -
40 HHSearch 54.2312% -1 - C1 -2C2A - ? -
6 PsiBlast_PDB 54.2237% 37 - C1 -3EHG - -
7 PsiBlast_PDB 53.7230% 7 - C1 -4GT8 - -