@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu39820: (2016-08-06 )
MAKKEFKAESKRLLDMMINSIYTQKEIFLRELISNSSDAIDKIYYKALTDDALTFDKDSYYIKVAADKDARTLTISDTGIGMTKDELEQHLGTIAKSGSLAFKKENELKDGHDIIGQFGVGFYAAFMVADVVTVISKALGSEEAYKWESAGADGYTIEPCEKDSVGTDIILKIKENTEDDSYDEFLEEYRLKAIIKKYSDFIRYPIKMDTTINKPKEGSENEFEEVQEEQTVNSMVPIWRKNKSELTDEDYEKFYAEKHYGFDKPLTHVHISVDGAVRYNAILFVPENMPFDYYSKEYEKGLELYSNGVLIMNKCADLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNISKKIKSELQSLLKKDREKYETFYKSFGRQLKFGVYNDFGANKDQLKDLLLFYSSKEKKLVSLDEYVSRMPEEQKFIYYATGDSYDRIEKLPQTEMVADKGYEILYFTEDIDEFAIKMLASYQEKEFKSVSSGDLGIDTDEDQKQSEEEESKYKDLFEEMKNILSDKVKNVRISKRLKSHPVCLAADGEVTIEMEKILNAMPDSQNVKAEKVLEINPNHEVFQTLQDAFEQDKEKLSLYTNLLYNQALLIEGLPIQDPVEFTNNICKVMV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_8(2O1U)
?
[Raw transfer]



ANP_A_8(2O1U)
?
[Raw transfer]



ANP_A_8(2O1U)
?
[Raw transfer]



ANP_B_9(2O1U)
?
[Raw transfer]



ADP_B_8(2O1V)
ENPL_CANLF
[Raw transfer]



ADP_A_7(2O1V)
ENPL_CANLF
[Raw transfer]



ADP_A_5(1Y4S)
HTPG_ECOLI
[Raw transfer]



ADP_A_5(1Y4S)
HTPG_ECOLI
[Raw transfer]



ADP_B_6(1Y4S)
HTPG_ECOLI
[Raw transfer]
1 PsiBlast_PDB 77.0639% 35 - C2 -2IOQ - HTPG_ECOLI -
112 HHSearch 76.2639% 43 - C2 -2IOQ - HTPG_ECOLI -
113 HHSearch 75.9636% 23 - C2 -2O1U 4.8 ?
24 PsiBlast_CBE 75.9236% 27 - C2 -2O1V 5.3 ENPL_CANLF
6 PsiBlast_PDB 75.8636% 30 - C2 -2O1V 5.3 ENPL_CANLF
101 Fugue 75.6636% 24 - C2 -2O1U 4.8 ?
8 PsiBlast_PDB 75.5731% 15 - C3 -4J0B - ? -
111 HHSearch 75.3039% 15 - C3 -2CG9 - HSP82_YEAST -
21 PsiBlast_CBE 75.1739% 46 - C2 -2IOP - HTPG_ECOLI -
5 PsiBlast_PDB 75.1136% 31 - C2 -2O1U 4.8 ?
4 PsiBlast_PDB 73.6937% 20 - C3 -2CG9 - HSP82_YEAST -
25 PsiBlast_CBE 73.2636% 30 - C2 -2O1U 5.7 ?
23 PsiBlast_CBE 72.1837% 34 - C3 -2CG9 - HSP82_YEAST -
26 PsiBlast_CBE 71.8731% 29 - C3 -4J0B - ? -
22 PsiBlast_CBE 68.9140% 23 - C2 -1Y4S 4.6 HTPG_ECOLI
119 HHSearch 66.5841% 29 - C2 -1Y4S 4.8 HTPG_ECOLI
2 PsiBlast_PDB 66.2440% 28 - C2 -1Y4S 4.8 HTPG_ECOLI
28 PsiBlast_CBE 65.3634% 8 - C3 -4Z1I - TRAP1_HUMAN -
29 PsiBlast_CBE 65.3434% 9 - C3 -4Z1I - TRAP1_HUMAN -
3 PsiBlast_PDB 65.2040% 38 - C2 -1Y4U - HTPG_ECOLI -