@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1433: (2016-05-01 )
MRAVFGCAIAVVGIAGSVVAGPADIHLVAAKQSYGFAVASVLPTRGQVVGVAHPVVVTFSAPITNPANRHAAERAVEVKSTPAMTGKFEWLDNDVVQWVPDRFWPAHSTVELSVGSLSSDFKTGPAVVGVASISQHTFTVSIDGVEEGPPPPLPAPHHRVHFGEDGVMPASMGRPEYPTPVGSYTVLSKERSVIMDSSSVGIPVDDPDGYRLSVDYAVRITSRGLYVHSAPWALPALGLENVSHGCISLSREDAEWYYNAVDIGDPVIVQE

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IM2_A_2(4JMX)
LDT1_MYCTU
[Raw transfer]



MXR_A_4(3VYP)
LDT2_MYCTU
[Raw transfer]



MXR_A_4(3VYP)
LDT2_MYCTU
[Raw transfer]



DWZ_A_3(4QR7)
LDT2_MYCTU
[Raw transfer]



MXR_B_6(3VYP)
LDT2_MYCTU
[Raw transfer]



3V5_A_3(4QTF)
LDT2_MYCTU
[Raw transfer]



DWZ_A_3(4GSU)
LDT2_MYCTU
[Raw transfer]



6CL_A_8(3TUR)
LDT2_MYCTO
[Raw transfer]



6CL_A_8(3TUR)
LDT2_MYCTO
[Raw transfer]



DWZ_B_4(4GSU)
LDT2_MYCTU
[Raw transfer]



BME_A_3(3U1Q)
LDT2_MYCTO
[Raw transfer]



BME_B_7(3U1Q)
LDT2_MYCTO
[Raw transfer]



BME_A_4(3U1Q)
LDT2_MYCTO
[Raw transfer]



DGL_A_7(3TUR)
LDT2_MYCTO
[Raw transfer]



PEG_B_9(3U1Q)
LDT2_MYCTO
[Raw transfer]
1 PsiBlast_PDB 95.6099%-112 - C3 -4K73 - LDT3_MYCTU -
35 HHSearch 94.9896%-112 - C3 -4K73 - LDT3_MYCTU -
36 HHSearch 83.8253%-117 * C3 *4JMN - LDT1_MYCTU -
55 Fugue 80.7539%-115 - C3 -3TUR 2.3 LDT2_MYCTO
39 HHSearch 74.8838%-110 - C3 -3VYP 2.7 LDT2_MYCTU
6 PsiBlast_PDB 73.9339% -98 - C3 -3TUR 2.3 LDT2_MYCTO
21 PsiBlast_CBE 73.6339% -96 - C3 -3U1Q 2.6 LDT2_MYCTO
7 PsiBlast_PDB 73.3039% -96 - C3 -3U1Q 2.6 LDT2_MYCTO
15 PsiBlast_PDB 73.2439% -95 - C3 -4HUC - LDT2_MYCTU -
28 PsiBlast_CBE 73.1838% -94 - C3 -3U1P - LDT2_MYCTO -
27 PsiBlast_CBE 73.1838% -94 - C3 -3VAE - LDT2_MYCTO -
17 PsiBlast_PDB 73.1038% -98 - C3 -3TX4 - LDT2_MYCTO -
38 HHSearch 73.0638%-109 - C3 -4QRB - LDT2_MYCTU -
3 PsiBlast_PDB 72.7747%-106 - C3 -4JMN - LDT1_MYCTU -
25 PsiBlast_CBE 72.6239% -96 - C3 -4HUC - LDT2_MYCTU -
19 PsiBlast_PDB 72.5638% -99 - C3 -3VAE - LDT2_MYCTO -
18 PsiBlast_PDB 72.5638% -99 - C3 -3U1P - LDT2_MYCTO -
22 PsiBlast_CBE 72.4739% -97 - C3 -3TUR 2.6 LDT2_MYCTO
9 PsiBlast_PDB 72.3439% -89 - C3 -4QRA - LDT2_MYCTU -
24 PsiBlast_CBE 72.2839% -95 - C3 -4GSU 3.7 LDT2_MYCTU
26 PsiBlast_CBE 72.2439% -90 - C3 -3VYP 3.0 LDT2_MYCTU
4 PsiBlast_PDB 72.2147%-105 - C3 -4JMX 2.8 LDT1_MYCTU
8 PsiBlast_PDB 72.0939% -89 - C3 -4QR7 3.6 LDT2_MYCTU
14 PsiBlast_PDB 71.8739% -91 - C3 -4GSU 2.4 LDT2_MYCTU
16 PsiBlast_PDB 71.7939% -90 - C3 -3VYP 2.7 LDT2_MYCTU
11 PsiBlast_PDB 70.6839% -90 - C3 -4QTF 2.5 LDT2_MYCTU