@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3109: (2016-05-16 )
MSTPTLPDMVAPSPRVRVKDRCRRMMGDLRLSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLSVGVSKVRITGGEPLIRPDLPEIVRTLSAKVGEDSGLRDLAITTNGVLLADRVDGLKAAGMKRITVSLDTLQPERFKAISQRNSHDKVIAGIKAVAAAGFTDTKIDTTVMRGANHDELADLIEFARTVNAEVRFIEYMDVGGATHWAWEKVFTKANMLESLEKRYGRIEPLPKHDTAPANRYALPDGTTFGIIASTTEPFCATCDRSRLTADGLWLHCLYAISGINLREPLRAGATHDDLVETVTTGWRRRTDRGAEQRLAQRERGVFLPLSTLKADPHLEMHTRGG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GTP_A_9(2FB3)
MOAA_STAA8
[Raw transfer]



SAM_B_6(1TV8)
MOAA_STAA8
[Raw transfer]



SAM_B_6(2FB2)
MOAA_STAA8
[Raw transfer]



SAM_A_5(2FB2)
MOAA_STAA8
[Raw transfer]



SAM_A_5(1TV8)
MOAA_STAA8
[Raw transfer]



SAM_A_5(1TV8)
MOAA_STAA8
[Raw transfer]



SAM_A_5(1TV8)
MOAA_STAA8
[Raw transfer]



POP_B_13(2FB3)
MOAA_STAA8
[Raw transfer]



DTU_A_11(1TV8)
MOAA_STAA8
[Raw transfer]



SF4_A_6(1TV7)
MOAA_STAA8
[Raw transfer]



SF4_B_8(1TV7)
MOAA_STAA8
[Raw transfer]



SF4_B_9(2FB2)
MOAA_STAA8
[Raw transfer]



SF4_A_7(2FB2)
MOAA_STAA8
[Raw transfer]



SF4_B_12(2FB3)
MOAA_STAA8
[Raw transfer]



5AD_A_10(2FB3)
MOAA_STAA8
[Raw transfer]
1 PsiBlast_PDB 98.7538% -85 * C2 *1TV7 2.8 MOAA_STAA8
42 Fugue 97.4937% -90 - C2 -1TV8 6.2 MOAA_STAA8
3 PsiBlast_PDB 96.7938% -82 - C2 -2FB3 6.0 MOAA_STAA8
4 PsiBlast_PDB 96.7337% -84 - C2 -2FB2 6.1 MOAA_STAA8
10 PsiBlast_CBE 96.6837% -85 - C2 -2FB2 6.4 MOAA_STAA8
2 PsiBlast_PDB 96.5638% -84 - C2 -1TV8 6.2 MOAA_STAA8
7 PsiBlast_CBE 96.4038% -85 - C2 -2FB3 3.7 MOAA_STAA8
8 PsiBlast_CBE 95.8838% -84 - C2 -1TV8 5.9 MOAA_STAA8
9 PsiBlast_CBE 95.6738% -85 - C2 -1TV7 2.7 MOAA_STAA8
17 HHSearch 94.7335% -95 - C2 -1TV8 6.2 MOAA_STAA8
44 Fugue 62.8414% -43 - C2 -1OLT - HEMN_ECOLI -
47 Fugue 59.4216% -49 - C2 -1R30 - BIOB_ECOLI -
30 HHSearch 56.3321% -61 - C2 -1R30 - BIOB_ECOLI -
29 HHSearch 55.7716% -77 - C2 -3T7V - PYLB_METBF -
49 Fugue 55.6616% -57 - C2 -2A5H - KAMA_CLOSU -
45 Fugue 53.4313% -33 - C2 -4K36 - ANSME_CLOP1 -
18 HHSearch 53.1713% -62 - C2 -4K36 - ANSME_CLOP1 -
34 HHSearch 52.7514% -68 - C2 -1OLT - HEMN_ECOLI -
27 HHSearch 52.6618% -73 - C2 -4RTB - ? -
28 HHSearch 52.0420% -67 - C2 -3RFA - RLMN_ECOLI -