@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3314c: (2016-05-18 )
MTDFAFDAPTVIRTKRDGGRLSDAAIDWVVKAYTDGRVADEQMSALLMAIVWRGMDRGEIARWTAAMLASGARLDFTDLPLATVDKHSTGGVGDKITLPLVPVVAACGGAVPQASGRGLGHTGGTLDKLESITGFTANLSNQRVREQLCDVGAAIFAAGQLAPADAKLYALRDITGTVESLPLIASSIMSKKLAEGAGALVLDVKVGSGAFMRSPVQARELAHTMVELGAAHGVPTRALLTEMNCPLGRTVGNALEVAEALEVLAGGGPPDVVELTLRLAGEMLELAGIHGRDPAQTLRDGTAMDRFRRLVAAQGGDLSKPLPIGSHSETVTAGASGTMGDIDAMAVGLAAWRLGAGRSRPGARVQHGAGVRIHRRPGEPVVVGEPLFTLYTNAPERFGAARAELAGGWSIRDSPPQVRPLIVDRIV

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

URA_B_7(1BRW)
PDP_GEOSE
[Raw transfer]




IUR_A_3(2WK6)
TYPH_HUMAN
[Raw transfer]




IUR_B_4(2WK6)
TYPH_HUMAN
[Raw transfer]




URI_B_6(4YYY)
?
[Raw transfer]




CMU_A_2(1UOU)
TYPH_HUMAN
[Raw transfer]




CMU_A_2(1UOU)
TYPH_HUMAN
[Raw transfer]




THM_A_9(4YEK)
?
[Raw transfer]




THM_A_2(3H5Q)
PDP_STAAC
[Raw transfer]




THM_A_2(3H5Q)
PDP_STAAC
[Raw transfer]




THM_B_20(4YEK)
?
[Raw transfer]




0NP_A_2(4EAD)
TYPH_ECOLI
[Raw transfer]




0NP_A_2(4EAD)
TYPH_ECOLI
[Raw transfer]




CIT_A_4(4YYY)
?
[Raw transfer]




CIT_B_8(4YYY)
?
[Raw transfer]




CIT_A_3(4YYY)
?
[Raw transfer]




38 HHSearch 97.9446% -83 - C10 -1BRW - PDP_GEOSE -
21 PsiBlast_CBE 95.4146% -80 - C10 -1BRW - PDP_GEOSE -
35 HHSearch 95.3445% -86 - C10 -1UOU 5.7 TYPH_HUMAN
5 PsiBlast_PDB 94.7544% -80 - C10 -2WK6 3.9 TYPH_HUMAN
34 HHSearch 94.6444% -81 * C10 *2DSJ - ? -
39 HHSearch 94.5141% -87 - C10 -3H5Q 4.0 PDP_STAAC
37 HHSearch 94.0642% -83 - C10 -4EAD 4.7 TYPH_ECOLI
23 PsiBlast_CBE 94.0444% -82 - C10 -2J0F - TYPH_HUMAN -
3 PsiBlast_PDB 94.0444% -82 - C10 -2J0F - TYPH_HUMAN -
12 PsiBlast_PDB 93.6641% -85 - C10 -4EAD 4.7 TYPH_ECOLI
11 PsiBlast_PDB 93.5841% -84 - C10 -2TPT - TYPH_ECOLI -
24 PsiBlast_CBE 93.4944% -79 - C10 -2J0F - TYPH_HUMAN -
29 PsiBlast_CBE 93.4241% -81 - C10 -4XR5 - TYPH_SALTY -
1 PsiBlast_PDB 93.3946% -78 - C10 -1BRW 2.6 PDP_GEOSE
13 PsiBlast_PDB 93.3841% -86 - C10 -4EAF - TYPH_ECOLI -
16 PsiBlast_PDB 93.3641% -85 - C10 -4XR5 - TYPH_SALTY -
17 PsiBlast_PDB 93.3341% -82 - C10 -4YEK 4.2 ?
8 PsiBlast_PDB 93.1841% -83 - C10 -1AZY - TYPH_ECOLI -
4 PsiBlast_PDB 93.1744% -80 - C10 -2WK5 - TYPH_HUMAN -
9 PsiBlast_PDB 93.1541% -86 - C10 -1OTP - TYPH_ECOLI -
7 PsiBlast_PDB 93.0443% -88 - C10 -1UOU 5.7 TYPH_HUMAN
18 PsiBlast_PDB 92.8741% -84 - C10 -4YYY 4.1 ?
6 PsiBlast_PDB 92.7939% -87 - C10 -3H5Q 4.0 PDP_STAAC
28 PsiBlast_CBE 92.7841% -84 - C10 -4YEK 3.9 ?
25 PsiBlast_CBE 92.5544% -79 - C10 -2WK6 3.8 TYPH_HUMAN
27 PsiBlast_CBE 92.2841% -82 - C10 -4YYY 3.4 ?