@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3596c: (2016-05-21 )
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSAGGPEPAAR

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_3(4CIU)
CLPB_ECOLI
[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



MNT_C_8(4LJ7)

[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



ACP_A_2(4LJA)

[Raw transfer]



ADP_X_8(1KSF)
CLPA_ECOLI
[Raw transfer]



MNT_B_6(4LJ7)
CLPB_THET8
[Raw transfer]



MNT_A_4(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_X_6(1R6B)
CLPA_ECOLI
[Raw transfer]



ADP_X_6(1R6B)
CLPA_ECOLI
[Raw transfer]



ADP_A_2(4LJ5)

[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FCW)
CLPB_THET8
[Raw transfer]



ADP_D_6(4FD2)

[Raw transfer]



ADP_A_4(4FD2)
CLPB_THET8
[Raw transfer]



ADP_B_5(4FD2)
CLPB_THET8
[Raw transfer]
4 PsiBlast_PDB 87.9760% -81 - C3 -3J3U - CLPC_BACSU -
1 PsiBlast_PDB 87.5460% -76 - C3 -3J3S - CLPC_BACSU -
3 PsiBlast_PDB 85.5160% -78 - C3 -3J3R - CLPC_BACSU -
2 PsiBlast_PDB 83.3260% -75 - C2 -3J3T - CLPC_BACSU -
110 HHSearch 82.9061% -92 - C2 -3PXI - CLPC_BACSU -
5 PsiBlast_PDB 82.0157% -92 - C2 -3PXI - CLPC_BACSU -
98 Fugue 80.8050% -83 - C2 -1QVR - CLPB_THET8 -
111 HHSearch 79.9156%-100 - C2 -4CIU 6.7 CLPB_ECOLI
109 HHSearch 77.4840% -91 - C2 -1R6B 8.0 CLPA_ECOLI
8 PsiBlast_PDB 76.4437% -92 - C2 -1R6B 8.0 CLPA_ECOLI
7 PsiBlast_PDB 74.5737% -93 - C2 -1KSF 8.0 CLPA_ECOLI
6 PsiBlast_PDB 60.2360% -74 - C2 -3PXG - CLPC_BACSU -
116 HHSearch 59.4360% -86 * C2 *4LJ9 6.5
9 PsiBlast_PDB 58.6959% -85 - C2 -4LJ9 6.5
11 PsiBlast_PDB 57.9959% -90 - C2 -4LJ4 - -
10 PsiBlast_PDB 57.9359% -88 - C2 -4LJA 6.7
21 PsiBlast_CBE 57.8259% -93 - C2 -4LJ7 8.2
12 PsiBlast_PDB 57.7859% -89 - C2 -4LJ5 6.7
17 PsiBlast_PDB 57.6258% -88 - C2 -4FCW 7.3 CLPB_THET8
22 PsiBlast_CBE 57.3159% -91 - C2 -4LJ7 6.8 CLPB_THET8
16 PsiBlast_PDB 56.3158% -84 - C2 -4FCV 6.6 CLPB_THET8
13 PsiBlast_PDB 56.2959% -93 - C2 -4LJ7 9.1 CLPB_THET8
15 PsiBlast_PDB 56.2358% -87 - C2 -4FD2 5.8 CLPB_THET8
24 PsiBlast_CBE 56.0058% -89 - C2 -4FD2 6.0 CLPB_THET8
23 PsiBlast_CBE 55.3558% -88 - C2 -4FD2 5.7