@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2796: (2016-02-11 )
MTSKLEQLKQYTTVVADTGDFDAIARLKPVDATTNPSLLLKAAALPRYAEHLRQATAGSGGDAGLACDRFAVAVGKDILGVIPGRISTEVDARLSFDSEATLARAHRLIELYDEQGIDRERVLIKIASTWEGIRAAEILEREGIQTNLTLLFSFAQAVACADAGVFLISPFVGRIYDWYKKSENRDYAGAEDPGVQSVSRIYRYYKANGYKTVVMGASFRNLGQIEQLAGCDRLTISPDLLQQLADAQGELPRLLLPGEGEPRQVLDESAFRWQMNEDAMATEKLAEGIRLFARDQEKLEYQLATRH

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

I22_A_3(3TKF)
?
[Raw transfer]



I22_A_3(3TKF)
?
[Raw transfer]



I22_A_3(3TNO)
?
[Raw transfer]



F6R_A_3(3TK7)
?
[Raw transfer]



I22_B_5(3TNO)
?
[Raw transfer]



F6R_B_4(3TK7)
?
[Raw transfer]



I22_B_9(3TKF)
?
[Raw transfer]



F6R_A_3(3TE9)
?
[Raw transfer]



A5P_A_4(3UPB)
?
[Raw transfer]



A5P_B_8(3UPB)
?
[Raw transfer]



I22_A_6(3S1X)
TAL_THEAC
[Raw transfer]



GOL_A_17(3CQ0)
TAL2_YEAST
[Raw transfer]



GOL_A_17(3CQ0)
TAL2_YEAST
[Raw transfer]



GOL_B_(3CQ0)
TAL2_YEAST
[Raw transfer]



GOL_A_15(3CQ0)
TAL2_YEAST
[Raw transfer]



EDO_A_4(3CLM)
TAL_NEIG1
[Raw transfer]



EDO_A_4(3HJZ)
TAL_PROM9
[Raw transfer]



EDO_A_4(3HJZ)
TAL_PROM9
[Raw transfer]
2 PsiBlast_PDB 91.8660% -84 - C5 -1UCW - TALB_ECOLI -
23 PsiBlast_CBE 91.7757% -81 - C5 -2E1D - TALDO_MOUSE -
66 HHSearch 91.7560% -78 - C5 -3CWN - TAL_ECO1E -
22 PsiBlast_CBE 91.7160% -82 - C5 -3KOF - TALB_ECOLI -
1 PsiBlast_PDB 91.6860% -79 - C5 -3CWN - TAL_ECO1E -
3 PsiBlast_PDB 91.6160% -81 - C5 -1ONR - TALB_ECOLI -
13 PsiBlast_PDB 91.5657% -82 - C5 -2CWN - TALDO_MOUSE -
6 PsiBlast_PDB 91.5660% -82 - C5 -1I2Q - TALB_ECOLI -
21 PsiBlast_CBE 91.4060% -79 - C5 -3CWN - TAL_ECO1E -
4 PsiBlast_PDB 91.3960% -85 - C5 -3KOF - TALB_ECOLI -
85 Fugue 91.3460% -81 - C5 -1ONR - TALB_ECOLI -
84 Fugue 91.3460% -79 - C5 -1ONR - TALB_ECOLI -
11 PsiBlast_PDB 91.3257% -84 - C5 -1F05 - TALDO_HUMAN -
5 PsiBlast_PDB 91.2560% -81 - C5 -1I2R - TALB_ECOLI -
8 PsiBlast_PDB 91.2260% -82 - C5 -1I2P - TALB_ECOLI -
7 PsiBlast_PDB 91.0760% -81 - C5 -1I2O - TALB_ECOLI -
65 HHSearch 90.9255% -88 - C5 -3HJZ 3.5 TAL_PROM9
68 HHSearch 90.8159% -81 - C5 -2E1D - TALDO_MOUSE -
9 PsiBlast_PDB 90.5560% -81 - C5 -1I2N - TALB_ECOLI -
12 PsiBlast_PDB 90.2557% -82 - C5 -2E1D - TALDO_MOUSE -
14 PsiBlast_PDB 88.3252% -95 - C5 -3HJZ 2.4 TAL_PROM9
69 HHSearch 88.2451% -82 * C5 *3TKF 6.1 ?
67 HHSearch 87.2852% -82 - C5 -3CQ0 2.7 TAL2_YEAST
26 PsiBlast_CBE 87.0152% -89 - C5 -3TNO 3.9 ?
16 PsiBlast_PDB 86.5152% -87 - C5 -3TNO 3.4 ?
31 PsiBlast_CBE 86.3951% -84 - C5 -3CQ0 3.0 TAL2_YEAST
28 PsiBlast_CBE 86.2351% -88 - C5 -3TKF 6.6 ?
30 PsiBlast_CBE 85.8651% -81 - C5 -3CQ0 6.0 TAL2_YEAST
27 PsiBlast_CBE 85.3852% -84 - C5 -3TK7 4.0 ?
20 PsiBlast_PDB 85.0751% -89 - C5 -3TKF 6.1 ?
15 PsiBlast_PDB 84.9752% -87 - C5 -3TK7 3.8 ?
17 PsiBlast_PDB 84.8752% -86 - C5 -3UPB 4.1 ?
25 PsiBlast_CBE 84.7452% -88 - C5 -3UPB 5.1 ?
19 PsiBlast_PDB 84.1251% -87 - C5 -3TE9 5.5 ?
73 HHSearch 66.0133% -93 - C5 -3S1X 3.5 TAL_THEAC