@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2892: (2016-02-11 )
MSLHGKTLFITGASRGIGREIALRAARDGANLVIAAKSAEPHPKLEGTIFSVAAEVEAAGGQALPLQLDVRDEQAVAAAMARAAERFGGIDALVNNAGAIRLVGVEKLEPKRFDLMYQINTRAVLVCSQAALPYLRRSANGHILSLSPPINLAGRWFAQHGPYTVTKYGMSMLTLGMHEEFGKYAISVNALWPKTMIATAAIEFELGSRDAFRRARTPAIMADAAHAILTSEGRSLSGRLLVDEELLRERGQSDFEQYRYDPEGGALVPDLFLD

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_7(2JAP)
?
[Raw transfer]



NDP_A_5(2JAP)
?
[Raw transfer]



NDP_C_9(2JAP)
?
[Raw transfer]



NDP_D_11(2JAP)
?
[Raw transfer]



GOL_B_14(3SC4)
?
[Raw transfer]



NAP_A_4(3KVO)
HSDL2_HUMAN
[Raw transfer]



NAP_A_4(3KVO)
HSDL2_HUMAN
[Raw transfer]



NAP_B_6(3KVO)
HSDL2_HUMAN
[Raw transfer]



EDO_A_3(3SC4)
?
[Raw transfer]



PEG_A_6(3OSU)
FABG_STAAM
[Raw transfer]



EDO_A_3(3SC4)
?
[Raw transfer]
1 PsiBlast_PDB 95.3654% -97 - C1 -3KVO 3.9 HSDL2_HUMAN
21 PsiBlast_CBE 95.2754% -98 - C1 -3KVO 3.3 HSDL2_HUMAN
120 HHSearch 95.0254% -98 - C1 -3KVO 3.9 HSDL2_HUMAN
3 PsiBlast_PDB 92.4549% -97 - C1 -3SC4 2.7 ?
2 PsiBlast_PDB 91.7954% -94 - C1 -3E03 - ? -
22 PsiBlast_CBE 91.5149% -97 - C1 -3SC4 3.1 ?
126 HHSearch 89.7450%-101 - C1 -3SC4 2.7 ?
41 PsiBlast_CBE 67.3334%-101 - C1 -2JAP 9.4 ?
42 PsiBlast_CBE 67.0234%-100 - C1 -2JAP 9.0 ?
7 PsiBlast_PDB 66.7528% -82 - C1 -3QLJ - ? -
43 PsiBlast_CBE 66.4134%-102 - C1 -2JAP 9.1 ?
44 PsiBlast_CBE 66.1234%-101 - C1 -2JAP 9.2 ?
121 HHSearch 63.5229% -79 - C1 -3GAF - ? -
127 HHSearch 63.2728% -83 - C1 -2CFC - HCDR_XANP2 -
18 PsiBlast_PDB 61.6327% -84 - C1 -3OID - FABL_BACSU -
135 HHSearch 61.5925% -83 - C1 -1GEE - DHG_BACME -
130 HHSearch 61.1429% -79 - C1 -3ICC - ? -
17 PsiBlast_PDB 60.1127% -94 - C1 -3OIC - FABL_BACSU -
131 HHSearch 58.3926% -83 - C1 -3WDS - ? -
129 HHSearch 58.3125% -77 - C1 -3AI3 - ? -
5 PsiBlast_PDB 49.3333% -67 - C1 -3OSU 2.4 FABG_STAAM