@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3295: (2016-02-15 )
MSLHGVYDSQNIFAKIIRGEAPCYKVYEDEDVLAFLDLFPQSYGHTLVIPKHAEARNLLEIEAQNLVKVMAVVQRLTRALVEEVQPDGVQVAQFNGAPAGQTVFHIHFHVIPRFSGENLGIHAAKQGDPEVLAQLQERLAQRLQG

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_A_5(3O0M)
?
[Raw transfer]




AMP_B_8(3O0M)
?
[Raw transfer]




5GP_A_9(3N1S)
HINT_ECOLI
[Raw transfer]




ADN_A_2(3O1C)
HINT1_RABIT
[Raw transfer]




MPD_A_4(3R6F)
?
[Raw transfer]




UNL_A_5(3LB5)
?
[Raw transfer]




EDO_B_10(3P0T)
?
[Raw transfer]




EDO_A_6(3P0T)
?
[Raw transfer]




EDO_A_7(3P0T)
?
[Raw transfer]




EDO_A_7(3P0T)
?
[Raw transfer]




EDO_B_12(3P0T)
?
[Raw transfer]




88 HHSearch 84.5445%-129 - C3 -3LB5 2.6 ?
87 HHSearch 81.7640%-130 - C3 -1Y23 - HIT_BACSU -
24 PsiBlast_CBE 81.2641%-132 - C3 -1Y23 - HIT_BACSU -
1 PsiBlast_PDB 80.9441%-130 - C3 -1Y23 - HIT_BACSU -
22 PsiBlast_CBE 79.9041%-131 - C3 -1Y23 - HIT_BACSU -
23 PsiBlast_CBE 79.8741%-131 - C3 -1Y23 - HIT_BACSU -
94 HHSearch 79.6734%-123 - C3 -3P0T 2.8 ?
21 PsiBlast_CBE 79.5641%-132 - C3 -1Y23 - HIT_BACSU -
6 PsiBlast_PDB 77.7833%-134 - C3 -3P0T 2.8 ?
26 PsiBlast_CBE 77.2246%-140 - C3 -3IMI - ? -
25 PsiBlast_CBE 76.7146%-142 - C3 -3IMI - ? -
29 PsiBlast_CBE 76.6133%-131 - C3 -3P0T 3.3 ?
5 PsiBlast_PDB 75.5338%-116 - C3 -3KSV - ? -
86 HHSearch 75.4936%-133 - C3 -3IMI - ? -
2 PsiBlast_PDB 75.3746%-140 - C3 -3IMI - ? -
27 PsiBlast_CBE 74.8646%-139 - C3 -3IMI - ? -
28 PsiBlast_CBE 74.0543%-131 - C3 -3O0M 4.7 ?
3 PsiBlast_PDB 73.9843%-129 - C3 -3O0M 4.5 ?
4 PsiBlast_PDB 73.8542%-137 - C3 -2EO4 - ? -
85 HHSearch 73.7335%-112 - C3 -3KSV - ? -
95 HHSearch 64.7430%-126 - C3 -3R6F 2.8 ?