@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3976: (2016-02-22 )
MKLRGLYAITDSQLLDDGRLLPYVEAALRGGARLLQYRDKSSDQARRLREAESLRELCERHGAQLIVNDDAELAARLGVGLHLGQTDGSLSAARALLGRQAIIGATCHAQLELAEQAVAEGASYVAFGRFFNSSTKPGAPAASVELLDQARPRLHLPITAIGGISLDTAPGLIARGVDLVAVIHALFAAASAAEVERRARAFSALFEPA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FQP_A_5(1G4P)
THIE_BACSU
[Raw transfer]




TPS_B_6(2TPS)
THIE_BACSU
[Raw transfer]




TPS_A_5(2TPS)
THIE_BACSU
[Raw transfer]




IFP_A_5(1G6C)
THIE_BACSU
[Raw transfer]




IFP_A_3(3O15)
THIE_BACSU
[Raw transfer]




FQP_B_6(1G4P)
THIE_BACSU
[Raw transfer]




ICP_A_5(1G69)
THIE_BACSU
[Raw transfer]




ICP_B_8(1G67)
THIE_BACSU
[Raw transfer]




POP_A_4(3O15)
THIE_BACSU
[Raw transfer]




POP_A_7(2TPS)
THIE_BACSU
[Raw transfer]




POP_A_7(2TPS)
THIE_BACSU
[Raw transfer]




POP_B_9(1G6C)
THIE_BACSU
[Raw transfer]




POP_A_7(1G4S)
THIE_BACSU
[Raw transfer]




POP_B_9(1G67)
THIE_BACSU
[Raw transfer]




POP_B_9(1G69)
THIE_BACSU
[Raw transfer]




POP_B_8(1G4T)
THIE_BACSU
[Raw transfer]




POP_A_7(1G4T)
THIE_BACSU
[Raw transfer]




POP_B_8(1G4S)
THIE_BACSU
[Raw transfer]




POP_A_6(1G6C)
THIE_BACSU
[Raw transfer]




POP_A_6(1G69)
THIE_BACSU
[Raw transfer]




POP_A_6(1G67)
THIE_BACSU
[Raw transfer]




POP_A_6(1G67)
THIE_BACSU
[Raw transfer]




55 HHSearch 96.5435%-131 - C3 -2TPS 3.6 THIE_BACSU
71 Fugue 95.8933%-121 - C3 -1G67 3.6 THIE_BACSU
72 Fugue 95.6033%-122 - C3 -2TPS 3.6 THIE_BACSU
1 PsiBlast_PDB 87.8936%-123 - C3 -3O15 3.6 THIE_BACSU
9 PsiBlast_PDB 87.4936%-125 - C3 -1G69 4.3 THIE_BACSU
6 PsiBlast_PDB 87.2536%-123 - C3 -1G4S 3.4 THIE_BACSU
8 PsiBlast_PDB 87.1936%-123 - C3 -1G6C 3.6 THIE_BACSU
3 PsiBlast_PDB 87.0436%-123 - C3 -1G4T 3.5 THIE_BACSU
22 PsiBlast_CBE 87.0236%-122 - C3 -1G4T 3.3 THIE_BACSU
4 PsiBlast_PDB 86.9336%-123 - C3 -1G67 3.6 THIE_BACSU
14 PsiBlast_PDB 86.7429%-112 - C3 -3NM3 - ? -
53 HHSearch 86.7230%-120 * C3 *1XI3 - THIE_PYRFU -
21 PsiBlast_CBE 86.6436%-127 - C3 -2TPS 6.6 THIE_BACSU
15 PsiBlast_PDB 86.5229%-117 - C3 -3NM1 - ? -
2 PsiBlast_PDB 86.5236%-126 - C3 -2TPS 6.7 THIE_BACSU
26 PsiBlast_CBE 86.2636%-124 - C3 -1G6C 3.6 THIE_BACSU
23 PsiBlast_CBE 85.9236%-123 - C3 -1G67 4.9 THIE_BACSU
54 HHSearch 85.1933%-116 - C3 -3O63 - THIE_MYCTU -
24 PsiBlast_CBE 85.1136%-124 - C3 -1G4S 3.4 THIE_BACSU
27 PsiBlast_CBE 84.9536%-121 - C3 -1G69 2.6 THIE_BACSU
5 PsiBlast_PDB 84.7036%-129 - C3 -1G4P 3.7 THIE_BACSU
25 PsiBlast_CBE 84.6336%-132 - C3 -1G4P 5.2 THIE_BACSU