@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4230: (2016-02-25 )
MKTPEDCTGLADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFAQIIHWYIAEQIKYWRQTRGAA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAL_B_6(3REM)
PCHB_PSEAE
[Raw transfer]



SAL_A_3(3REM)
PCHB_PSEAE
[Raw transfer]



SAL_A_3(3HGX)
PCHB_PSEAE
[Raw transfer]



SAL_B_6(3HGX)
PCHB_PSEAE
[Raw transfer]



SAL_B_6(3RET)
PCHB_PSEAE
[Raw transfer]



SAL_A_3(3RET)
PCHB_PSEAE
[Raw transfer]



SAL_A_3(3RET)
PCHB_PSEAE
[Raw transfer]



PYR_C_8(2H9D)
PCHB_PSEAE
[Raw transfer]



PYR_D_7(2H9D)
PCHB_PSEAE
[Raw transfer]



PYR_A_10(2H9D)
PCHB_PSEAE
[Raw transfer]



PYR_B_9(2H9D)
PCHB_PSEAE
[Raw transfer]
21 PsiBlast_CBE 96.13100%-105 - C2 -2H9D 2.1 PCHB_PSEAE
5 PsiBlast_PDB 94.6699%-109 - C2 -3HGX 4.0 PCHB_PSEAE
28 HHSearch 93.5799%-116 - C2 -3RET 3.4 PCHB_PSEAE
4 PsiBlast_PDB 93.5799%-116 - C2 -3RET 3.4 PCHB_PSEAE
20 PsiBlast_CBE 93.53100%-113 - C2 -3REM 3.8 PCHB_PSEAE
22 PsiBlast_CBE 93.23100%-108 - C2 -2H9D 2.3 PCHB_PSEAE
26 PsiBlast_CBE 92.9399%-105 - C2 -3HGX 4.0 PCHB_PSEAE
2 PsiBlast_PDB 92.64100%-111 - C2 -3REM 3.8 PCHB_PSEAE
25 PsiBlast_CBE 91.5799%-129 - C2 -3RET 3.9 PCHB_PSEAE
24 PsiBlast_CBE 91.0099%-100 - C2 -3HGW - PCHB_PSEAE -
6 PsiBlast_PDB 90.62100%-133 - C2 -2H9C - PCHB_PSEAE -
27 PsiBlast_CBE 87.77100%-120 - C2 -2H9C - PCHB_PSEAE -
23 PsiBlast_CBE 86.03100%-135 - C2 -2H9D 2.8 PCHB_PSEAE
1 PsiBlast_PDB 84.34100%-127 - C2 -2H9D 2.6 PCHB_PSEAE
3 PsiBlast_PDB 83.3099%-117 - C2 -3HGW - PCHB_PSEAE -
48 Fugue 81.0097%-113 - C2 -3HGW - PCHB_PSEAE -
31 HHSearch 70.4126% -90 - C2 -2GTV - CHMU_METJA -
49 Fugue 66.5621% -96 - C2 -1ECM - PHEA_ECOLI -
29 HHSearch 66.4020% -97 - C2 -1ECM - PHEA_ECOLI -
30 HHSearch 64.1622% -86 - C2 -3RMI - ? -