@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4973: (2016-03-03 )
MSATQKNNITRLEQLDRQSTQPFPNSRKVYLTGSRPDIRVPVREISLADTPTAFGGEKNPPVFVYDTSGPYTDPEVRIDLRKGLPDVRSRWIDERGDTEILPGLTSEFGQARLADASLDALRFAHVRTPRRAKPGANVSQMHYAKKGIITPEMEYIAIRENMKLQEARAAGLLDQQHPGHSFGANIPKEITPEFVREEVARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSSIEEEVEKLTWGIRWGADTVMDLSTGKHIHETREWILRNSPVPIGTVPIYQALEKVNGVAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHQENFLYTHFEEICEIMKAYDVSFSLGDGLRPGSVADANDAAQFGELETLGELTKIAWKHDVQVMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAFHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVRDYAKENGLSDESKAIEAGFQEQAARFKDEGSVIYRQV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AIR_A_3(4S27)
THIC_ARATH
[Raw transfer]



AIR_A_3(4S28)
THIC_ARATH
[Raw transfer]



IRN_A_2(4S29)
THIC_ARATH
[Raw transfer]



IRN_A_3(3EPN)
THIC_CAUCR
[Raw transfer]



SAH_A_4(4S28)
THIC_ARATH
[Raw transfer]



IRN_A_3(3EPN)
THIC_CAUCR
[Raw transfer]



SAH_A_4(4S25)
THIC_ARATH
[Raw transfer]



SAH_B_11(4S26)
THIC_ARATH
[Raw transfer]



SAH_A_5(4S26)
THIC_ARATH
[Raw transfer]



MP5_B_4(3EPO)
THIC_CAUCR
[Raw transfer]



MP5_A_3(3EPO)
THIC_CAUCR
[Raw transfer]



MP5_A_3(3EPO)
THIC_CAUCR
[Raw transfer]



MP5_A_3(3EPO)
THIC_CAUCR
[Raw transfer]



HMH_A_4(3EPM)
THIC_CAUCR
[Raw transfer]



5AD_A_4(4S27)
THIC_ARATH
[Raw transfer]
3 PsiBlast_PDB 97.5367% -54 - C5 -4S2A - THIC_CAUCR -
2 PsiBlast_PDB 92.9967% -60 - C5 -3EPO 4.6 THIC_CAUCR
37 Fugue 92.9671% -54 - C5 -3EPO 4.6 THIC_CAUCR
11 PsiBlast_CBE 92.7567% -61 - C5 -3EPO 5.1 THIC_CAUCR
12 PsiBlast_CBE 92.1367% -60 - C5 -3EPN 6.3 THIC_CAUCR
14 HHSearch 91.9468% -55 - C5 -3EPO 4.6 THIC_CAUCR
4 PsiBlast_PDB 91.9365% -61 - C5 -3EPM 3.0 THIC_CAUCR
1 PsiBlast_PDB 91.7367% -59 - C5 -3EPN 5.6 THIC_CAUCR
9 PsiBlast_PDB 90.6061% -67 - C5 -4S28 6.4 THIC_ARATH
8 PsiBlast_PDB 90.1861% -67 - C5 -4S27 6.5 THIC_ARATH
7 PsiBlast_PDB 89.9561% -66 - C5 -4S26 4.7 THIC_ARATH
13 PsiBlast_CBE 89.7561% -68 - C5 -4S26 5.1 THIC_ARATH
6 PsiBlast_PDB 89.7461% -66 - C5 -4S25 5.2 THIC_ARATH
10 PsiBlast_PDB 87.4961% -63 - C5 -4S29 6.6 THIC_ARATH
5 PsiBlast_PDB 86.8961% -64 - C5 -4N7Q - THIC_ARATH -
15 HHSearch 47.5314% -56 - C5 -3NVT - ? -
29 HHSearch 46.5713% -67 - C5 -2YCI - ? -
45 Fugue 45.2415% -7 - C3 -3KMQ - ? -
25 HHSearch 44.7412% -81 - C5 -1MZH - DEOC_AQUAE -
46 Fugue 43.3116% -31 - C1 -4ZUZ - ? -