@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00018_LYN_MO: (2014-08-10 )
MGCIKSKRKDNLNDDEVDSKTQPVRNTDRTIYVRDPTSNKQQRPVPEFHLLPGQRFQTKDPEEQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHGEWWKAKSLSSKREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGNSAGAFLIRESETLKGSFSLSVRDYDPMHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQKQSDGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP

Atome Classification :

(62 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

L3G_A_3(2C0T)
HCK_HUMAN
[Raw transfer]




L2G_A_3(2C0O)
HCK_HUMAN
[Raw transfer]




L1G_A_3(2C0I)
HCK_HUMAN
[Raw transfer]




VRZ_B_8(3VRZ)
HCK_HUMAN
[Raw transfer]




VSE_B_10(4LUE)
?
[Raw transfer]




VSG_A_3(3VS5)
HCK_HUMAN
[Raw transfer]




L2G_B_5(2C0O)
HCK_HUMAN
[Raw transfer]




VRZ_A_5(3VRZ)
HCK_HUMAN
[Raw transfer]




L3G_B_6(2C0T)
HCK_HUMAN
[Raw transfer]




VS0_A_5(3VS0)
HCK_HUMAN
[Raw transfer]




VSF_A_5(3VS4)
HCK_HUMAN
[Raw transfer]




VSB_A_3(3VS2)
HCK_HUMAN
[Raw transfer]




VSF_B_8(3VS4)
HCK_HUMAN
[Raw transfer]




L1G_B_5(2C0I)
HCK_HUMAN
[Raw transfer]




VSB_B_7(3VS2)
HCK_HUMAN
[Raw transfer]




VSE_B_7(3VS3)
HCK_HUMAN
[Raw transfer]




B43_A_3(3VRY)
HCK_HUMAN
[Raw transfer]




VSA_B_8(3VS1)
HCK_HUMAN
[Raw transfer]




B43_B_7(3VRY)
HCK_HUMAN
[Raw transfer]




VSH_A_6(3VS6)
HCK_HUMAN
[Raw transfer]




VSH_B_10(3VS6)
HCK_HUMAN
[Raw transfer]




VSA_A_5(3VS1)
HCK_HUMAN
[Raw transfer]




VSE_A_3(3VS3)
HCK_HUMAN
[Raw transfer]




VS0_B_8(3VS0)
HCK_HUMAN
[Raw transfer]




VSG_B_6(3VS5)
HCK_HUMAN
[Raw transfer]




VSE_A_4(4LUE)
?
[Raw transfer]




GOL_A_6(4LUE)
?
[Raw transfer]




PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]




B43_A_2(3GEN)

[Raw transfer]




KS1_B_6(3VS7)
HCK_HUMAN
[Raw transfer]




13L_A_2(4HCU)

[Raw transfer]




PP2_A_2(2ZV9)
LYN_MOUSE
[Raw transfer]




ANP_A_2(2ZV8)
LYN_MOUSE
[Raw transfer]




S03_C_3(1YOL)
SRC_HUMAN
[Raw transfer]




STI_A_3(4BKJ)
DDR1_HUMAN
[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




GOL_B_13(4LUE)
?
[Raw transfer]




242_D_4(2OFV)
?
[Raw transfer]




242_C_3(2OFV)
LCK_HUMAN
[Raw transfer]




9NH_A_2(3B2W)
LCK_HUMAN
[Raw transfer]




AM6_A_2(3BYU)
LCK_HUMAN
[Raw transfer]




SK8_A_5(4LUD)
?
[Raw transfer]




PP2_A_2(3SXS)

[Raw transfer]




547_B_2(2OF2)
LCK_HUMAN
[Raw transfer]




1N8_D_4(2OG8)
?
[Raw transfer]




STI_A_4(1T46)

[Raw transfer]




STU_X_2(3A4O)
LYN_HUMAN
[Raw transfer]




1BM_A_2(2HK5)
HCK_HUMAN
[Raw transfer]




SK8_B_8(4LUD)
?
[Raw transfer]




5LK_A_2(3MPM)
LCK_HUMAN
[Raw transfer]




7KW_A_2(4C3F)
LCK_HUMAN
[Raw transfer]




1N1_A_2(2ZVA)
LYN_MOUSE
[Raw transfer]




P16_A_3(1OPK)
ABL1_MOUSE
[Raw transfer]




979_B_2(2OF4)
LCK_HUMAN
[Raw transfer]




STI_A_2(2PL0)
LCK_HUMAN
[Raw transfer]




07J_A_3(3TT0)
FGFR1_HUMAN
[Raw transfer]




STU_A_2(1U59)

[Raw transfer]




00J_A_2(2XIR)

[Raw transfer]




MPZ_G_7(1Y57)
SRC_HUMAN
[Raw transfer]




VGH_A_2(3ZBF)

[Raw transfer]




0VF_A_2(4FYO)

[Raw transfer]




24A_C_3(2BDF)
SRC_HUMAN
[Raw transfer]




HET_B_2(2BDJ)
SRC_HUMAN
[Raw transfer]




DB8_A_3(4MXO)
SRC_HUMAN
[Raw transfer]




EDO_A_3(3MPM)
LCK_HUMAN
[Raw transfer]




45 PsiBlast_CBE 95.5577%-107 - C3 -2C0T 11.3 HCK_HUMAN
32 PsiBlast_CBE 95.3577%-110 - C3 -3VS3 9.3 HCK_HUMAN
41 PsiBlast_CBE 95.0377%-109 - C3 -3VRZ 9.4 HCK_HUMAN
35 PsiBlast_CBE 95.0177%-113 - C3 -3VS2 8.8 HCK_HUMAN
31 PsiBlast_CBE 94.7877%-109 - C3 -3VS4 8.7 HCK_HUMAN
28 PsiBlast_CBE 94.6777%-112 - C3 -3VS5 8.5 HCK_HUMAN
33 PsiBlast_CBE 94.5877%-107 - C3 -3VS3 9.1 HCK_HUMAN
48 PsiBlast_CBE 94.5077%-108 - C3 -2C0I 11.3 HCK_HUMAN
43 PsiBlast_CBE 94.4077%-110 - C3 -3VRY 8.9 HCK_HUMAN
50 PsiBlast_CBE 94.3877%-105 - C3 -1QCF 6.6 HCK_HUMAN
27 PsiBlast_CBE 94.3177%-111 - C3 -3VS6 8.4 HCK_HUMAN
26 PsiBlast_CBE 94.3077%-109 - C3 -3VS6 8.1 HCK_HUMAN
44 PsiBlast_CBE 94.2677%-109 - C3 -2C0T 10.5 HCK_HUMAN
49 PsiBlast_CBE 94.2577%-110 - C3 -2C0I 11.4 HCK_HUMAN
40 PsiBlast_CBE 94.2477%-111 - C3 -3VRZ 9.7 HCK_HUMAN
37 PsiBlast_CBE 94.1677%-104 - C3 -3VS1 8.9 HCK_HUMAN
47 PsiBlast_CBE 94.1477%-107 - C3 -2C0O 11.0 HCK_HUMAN
46 PsiBlast_CBE 94.1277%-111 - C3 -2C0O 10.8 HCK_HUMAN
30 PsiBlast_CBE 94.1077%-108 - C3 -3VS4 8.8 HCK_HUMAN
24 PsiBlast_CBE 94.0477%-109 - C3 -4LUD 4.6 ?
42 PsiBlast_CBE 93.9677%-111 - C3 -3VRY 8.9 HCK_HUMAN
39 PsiBlast_CBE 93.6977%-109 - C3 -3VS0 9.0 HCK_HUMAN
38 PsiBlast_CBE 93.5477%-107 - C3 -3VS0 8.3 HCK_HUMAN
29 PsiBlast_CBE 93.5277%-111 - C3 -3VS5 8.5 HCK_HUMAN
25 PsiBlast_CBE 93.3077%-104 - C3 -3VS7 6.6 HCK_HUMAN
22 PsiBlast_CBE 93.1477%-106 - C3 -4LUE 9.4 ?
23 PsiBlast_CBE 93.1277%-107 - C3 -4LUD 5.9 ?
34 PsiBlast_CBE 92.9177%-109 - C3 -3VS2 8.6 HCK_HUMAN
36 PsiBlast_CBE 92.8477%-110 - C3 -3VS1 9.1 HCK_HUMAN
21 PsiBlast_CBE 91.0977%-107 - C3 -4LUE 9.5 ?
2 PsiBlast_PDB 87.9559%-105 - C3 -1Y57 7.3 SRC_HUMAN
66 HHSearch 81.3742%-102 - C3 -1OPK 10.1 ABL1_MOUSE
6 PsiBlast_PDB 71.1999%-128 - C3 -2ZVA 7.8 LYN_MOUSE
4 PsiBlast_PDB 70.1499%-129 - C3 -2ZV8 3.9 LYN_MOUSE
5 PsiBlast_PDB 69.1599%-130 - C3 -2ZV9 5.8 LYN_MOUSE
8 PsiBlast_PDB 68.0983%-128 - C3 -2HK5 9.2 HCK_HUMAN
1 PsiBlast_PDB 67.6398%-114 - C3 -3A4O 7.8 LYN_HUMAN
13 PsiBlast_PDB 67.5873%-127 - C3 -2OF2 7.1 LCK_HUMAN
14 PsiBlast_PDB 67.3673%-127 - C3 -2OF4 6.4 LCK_HUMAN
12 PsiBlast_PDB 65.9574%-125 - C3 -3BYU 11.2 LCK_HUMAN
11 PsiBlast_PDB 65.7874%-127 - C3 -3B2W 11.1 LCK_HUMAN
10 PsiBlast_PDB 64.9474%-125 - C3 -2OFV 10.6 LCK_HUMAN
52 PsiBlast_CBE 64.7074%-126 - C3 -2OG8 10.3 ?
15 PsiBlast_PDB 64.6573%-123 - C3 -3MPM 7.2 LCK_HUMAN
9 PsiBlast_PDB 64.3274%-118 - C3 -2PL0 9.9 LCK_HUMAN
20 PsiBlast_PDB 64.2067%-126 - C3 -4MXO 7.3 SRC_HUMAN
19 PsiBlast_PDB 64.0767%-126 - C3 -2BDJ 9.2 SRC_HUMAN
16 PsiBlast_PDB 64.0373%-122 - C3 -4C3F 7.4 LCK_HUMAN
18 PsiBlast_PDB 63.8467%-121 - C3 -2BDF 7.1 SRC_HUMAN
17 PsiBlast_PDB 63.5267%-123 - C3 -1YOL 4.1 SRC_HUMAN
51 PsiBlast_CBE 63.0774%-125 - C3 -2OFV 10.7 ?
80 HHSearch 59.8542%-123 - C3 -3GEN 8.7
77 HHSearch 58.5944%-116 - C3 -3SXS 7.3
89 HHSearch 58.0441%-116 - C3 -3KUL 3.0 EPHA8_HUMAN
79 HHSearch 57.9541%-115 - C3 -4HCU 8.9
86 HHSearch 57.5337%-106 - C3 -4BKJ 11.1 DDR1_HUMAN
87 HHSearch 56.9244%-119 * C3 *3ZBF 6.7
78 HHSearch 56.9239%-106 - C3 -1T46 11.1
72 HHSearch 56.2736%-110 - C3 -1U59 8.7
81 HHSearch 55.8739%-101 - C3 -2XIR 9.2
75 HHSearch 55.3037%-104 - C3 -3TT0 8.0 FGFR1_HUMAN
74 HHSearch 54.9837%-120 - C3 -4FYO 6.5