@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00026_BACE2_: (2014-08-10 )
MGALARALLLPLLAQWLLRAAPELAPAPFTLPLRVAAATNRVVAPTPGPGTPAERHADGLALALEPALASPAGAANFLAMVDNLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYIDTYFDTERSSTYRSKGFDVTVKYTQGSWTGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAGAAVSEISGPFSTEDVASNCVPAQSLSEPILWIVSYALMSVCGAILLVLIVLLLLPFRCQRRPRDPEVVNDESSLVRHRWK

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

WZV_B_4(3ZKI)
BACE2_HUMAN
[Raw transfer]




WZV_A_3(3ZKI)
BACE2_HUMAN
[Raw transfer]




Z75_A_4(3LPJ)
BACE1_HUMAN
[Raw transfer]




012_A_13(3CKP)
BACE1_HUMAN
[Raw transfer]




6T9_A_5(3ZLQ)
BACE2_HUMAN
[Raw transfer]




L01_A_6(1W51)
BACE1_HUMAN
[Raw transfer]




6T9_B_6(3ZLQ)
BACE2_HUMAN
[Raw transfer]




1W0_A_2(4L7G)
BACE1_HUMAN
[Raw transfer]




H24_A_5(2VA6)
BACE1_HUMAN
[Raw transfer]




C27_A_5(2VA7)
BACE1_HUMAN
[Raw transfer]




009_A_4(3CKR)
BACE1_HUMAN
[Raw transfer]




C8C_A_4(2VA5)
BACE1_HUMAN
[Raw transfer]




C6A_A_2(3QI1)
BACE1_HUMAN
[Raw transfer]




B3P_B_7(4BEL)
BACE2_HUMAN
[Raw transfer]




B3P_B_5(4BFB)
BACE2_HUMAN
[Raw transfer]




3RS_A_9(3RSV)
BACE1_HUMAN
[Raw transfer]




B3P_A_6(4BEL)
BACE2_HUMAN
[Raw transfer]




B3P_A_3(3ZKQ)
BACE2_HUMAN
[Raw transfer]




B3P_A_3(3ZKG)
BACE2_HUMAN
[Raw transfer]




BAM_A_4(3PVK)
CARP2_CANAX
[Raw transfer]




BAM_A_3(3PVK)
CARP2_CANAX
[Raw transfer]




EDO_A_7(4AUC)
CHYM_BOVIN
[Raw transfer]




21 PsiBlast_CBE 99.06100%-131 - C7 -4BFB 2.5 BACE2_HUMAN
22 PsiBlast_CBE 99.02100%-132 - C7 -4BEL 2.5 BACE2_HUMAN
3 PsiBlast_PDB 98.83100%-130 - C7 -3ZKQ 2.4 BACE2_HUMAN
7 PsiBlast_PDB 98.8099%-136 - C7 -3ZKG 2.7 BACE2_HUMAN
6 PsiBlast_PDB 98.2499%-131 - C7 -3ZLQ 4.6 BACE2_HUMAN
4 PsiBlast_PDB 98.08100%-132 - C7 -4BEL 2.4 BACE2_HUMAN
8 PsiBlast_PDB 97.7099%-134 - C7 -3ZKI 6.2 BACE2_HUMAN
25 PsiBlast_CBE 97.6199%-132 - C7 -3ZLQ 4.4 BACE2_HUMAN
26 PsiBlast_CBE 96.9499%-133 - C7 -3ZKI 6.7 BACE2_HUMAN
40 HHSearch 85.5850%-112 - C7 -3LPJ 12.2 BACE1_HUMAN
20 PsiBlast_PDB 85.1954%-120 - C7 -3RSV 7.7 BACE1_HUMAN
42 HHSearch 85.0753%-113 - C7 -4L7G 4.5 BACE1_HUMAN
15 PsiBlast_PDB 84.9254%-115 - C7 -3CKP 8.2 BACE1_HUMAN
11 PsiBlast_PDB 84.8354%-122 - C7 -3QI1 10.1 BACE1_HUMAN
19 PsiBlast_PDB 84.1754%-117 - C7 -1W51 10.1 BACE1_HUMAN
13 PsiBlast_PDB 83.9954%-118 - C7 -2VA6 5.1 BACE1_HUMAN
12 PsiBlast_PDB 83.7554%-115 - C7 -2VA5 4.2 BACE1_HUMAN
14 PsiBlast_PDB 83.4654%-119 - C7 -2VA7 6.2 BACE1_HUMAN
16 PsiBlast_PDB 83.2054%-115 - C7 -3CKR 8.8 BACE1_HUMAN