@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00061_FABP5_: (2014-08-12 )
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

G2A_A_2(4AZQ)
FABP5_MOUSE
[Raw transfer]




G2A_A_2(4AZQ)
FABP5_MOUSE
[Raw transfer]




OLA_A_4(1PMP)
MYP2_BOVIN
[Raw transfer]




PLM_A_2(2WUT)
MYP2_HUMAN
[Raw transfer]




PLM_A_5(4A1Y)
MYP2_HUMAN
[Raw transfer]




PLM_A_2(4A8Z)
MYP2_HUMAN
[Raw transfer]




PLM_A_2(3NR3)
MYP2_HUMAN
[Raw transfer]




A9M_A_2(4AZP)
FABP5_MOUSE
[Raw transfer]




PLM_A_4(4A1H)
MYP2_HUMAN
[Raw transfer]




T4B_A_3(4AZM)
FABP5_HUMAN
[Raw transfer]




ZGB_A_2(3P6D)
FABP4_HUMAN
[Raw transfer]




T4B_B_5(4AZM)
FABP5_HUMAN
[Raw transfer]




PAM_A_2(3PPT)
?
[Raw transfer]




HXA_C_3(1FDQ)
FABP7_HUMAN
[Raw transfer]




PLM_B_2(1B56)
FABP5_HUMAN
[Raw transfer]




A9M_B_4(4AZR)
FABP5_HUMAN
[Raw transfer]




2AN_A_5(3WBG)
FABPH_HUMAN
[Raw transfer]




A9M_A_3(4AZR)
FABP5_HUMAN
[Raw transfer]




EPE_A_2(1YIV)
MYP2_HORSE
[Raw transfer]




LDA_A_3(1YIV)
MYP2_HORSE
[Raw transfer]




EDO_A_4(4A60)
FABP9_HUMAN
[Raw transfer]




15 PsiBlast_CBE 97.06100% -88 - C4 -1B56 5.9 FABP5_HUMAN
29 HHSearch 93.7981% -85 - C4 -4AZQ 7.7 FABP5_MOUSE
6 PsiBlast_PDB 91.5680% -88 - C4 -4AZP 6.5 FABP5_MOUSE
17 PsiBlast_CBE 86.8799% -82 - C4 -4AZR 2.8 FABP5_HUMAN
1 PsiBlast_PDB 86.72100% -87 - C4 -4AZM 4.1 FABP5_HUMAN
16 PsiBlast_CBE 86.13100% -85 - C4 -4AZM 4.9 FABP5_HUMAN
2 PsiBlast_PDB 84.0799% -80 - C4 -4AZR 3.3 FABP5_HUMAN
38 HHSearch 83.6850% -75 - C4 -4A60 - FABP9_HUMAN
7 PsiBlast_PDB 83.6156% -83 - C4 -3NR3 6.5 MYP2_HUMAN
30 HHSearch 80.7751% -82 - C4 -3P6D 4.1 FABP4_HUMAN
34 HHSearch 79.5348% -76 * C4 *3WBG 5.1 FABPH_HUMAN
10 PsiBlast_PDB 79.2958% -71 - C4 -2WUT 6.4 MYP2_HUMAN
8 PsiBlast_PDB 78.9058% -76 - C4 -4A1H 5.8 MYP2_HUMAN
31 HHSearch 78.6445% -79 - C4 -1FDQ 4.8 FABP7_HUMAN
12 PsiBlast_PDB 78.5657% -67 - C4 -4A8Z 6.0 MYP2_HUMAN
9 PsiBlast_PDB 78.1958% -70 - C4 -4A1Y 6.4 MYP2_HUMAN
11 PsiBlast_PDB 77.7558% -72 - C4 -1PMP 5.7 MYP2_BOVIN
13 PsiBlast_PDB 76.8057% -71 - C4 -1YIV 4.1 MYP2_HORSE
41 HHSearch 76.2045% -70 - C4 -3PPT 4.8 ?