@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00061_RABP2_: (2014-08-12 )
MPNFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

R12_B_2(3CBS)
RABP2_HUMAN
[Raw transfer]




REA_B_2(1CBS)
RABP2_HUMAN
[Raw transfer]




REA_A_3(2G78)
RABP2_HUMAN
[Raw transfer]




REA_A_3(2FR3)
RABP2_HUMAN
[Raw transfer]




R13_B_2(2CBS)
RABP2_HUMAN
[Raw transfer]




G2A_A_2(4AZQ)
FABP5_MOUSE
[Raw transfer]




REA_A_3(3CWK)
RABP2_HUMAN
[Raw transfer]




RE9_G_7(1CBQ)
RABP2_HUMAN
[Raw transfer]




A80_B_2(2CBR)
RABP1_BOVIN
[Raw transfer]




REA_B_4(1CBR)
RABP1_MOUSE
[Raw transfer]




RET_A_7(2G79)
RABP2_HUMAN
[Raw transfer]




PAM_A_2(3PPT)
?
[Raw transfer]




REA_A_3(1CBR)
RABP1_MOUSE
[Raw transfer]




AZE_A_4(2G7B)
RABP2_HUMAN
[Raw transfer]




HXA_C_3(1FDQ)
FABP7_HUMAN
[Raw transfer]




2AN_A_5(3WBG)
FABPH_HUMAN
[Raw transfer]




RET_A_2(4I9S)
RABP2_HUMAN
[Raw transfer]




B3P_A_3(3FEL)
RABP2_HUMAN
[Raw transfer]




LMC_A_2(3FEP)
RABP2_HUMAN
[Raw transfer]




RET_A_2(4M6S)
RABP2_HUMAN
[Raw transfer]




B3P_A_5(3D97)
RABP2_HUMAN
[Raw transfer]




RET_A_2(4I9R)
RABP2_HUMAN
[Raw transfer]




B3P_A_2(3F8A)
RABP2_HUMAN
[Raw transfer]




B3P_B_5(3FEL)
RABP2_HUMAN
[Raw transfer]




RET_A_2(4M7M)
RABP2_HUMAN
[Raw transfer]




B3P_B_4(3FA7)
RABP2_HUMAN
[Raw transfer]




MES_A_3(3FEP)
RABP2_HUMAN
[Raw transfer]




LSR_A_3(3FA6)
RABP2_HUMAN
[Raw transfer]




LSR_A_3(3F9D)
RABP2_HUMAN
[Raw transfer]




LSR_A_2(3CR6)
RABP2_HUMAN
[Raw transfer]




LSR_B_4(3F9D)
RABP2_HUMAN
[Raw transfer]




LSR_A_3(3F8A)
RABP2_HUMAN
[Raw transfer]




B3P_A_3(3FA7)
RABP2_HUMAN
[Raw transfer]




LSR_B_4(3FA6)
RABP2_HUMAN
[Raw transfer]




EDO_A_4(4A60)
FABP9_HUMAN
[Raw transfer]




PEG_A_4(3FEK)
RABP2_HUMAN
[Raw transfer]




B3P_A_4(3FEL)
RABP2_HUMAN
[Raw transfer]




PEG_A_5(3FEK)
RABP2_HUMAN
[Raw transfer]




16 PsiBlast_PDB 95.7191% -95 - C9 -3F9D 3.8 RABP2_HUMAN
17 PsiBlast_PDB 94.9691% -82 - C9 -3FEL 3.3 RABP2_HUMAN
3 PsiBlast_PDB 94.9593% -80 - C9 -2FR3 6.9 RABP2_HUMAN
1 PsiBlast_PDB 94.4893% -88 - C9 -2CBS 7.0 RABP2_HUMAN
7 PsiBlast_PDB 93.9393% -79 - C9 -1CBS 6.6 RABP2_HUMAN
2 PsiBlast_PDB 93.5593% -87 - C9 -3CBS 6.8 RABP2_HUMAN
20 PsiBlast_PDB 93.5291% -82 - C9 -2G7B 6.1 RABP2_HUMAN
6 PsiBlast_PDB 93.3593% -78 - C9 -1CBQ 7.3 RABP2_HUMAN
12 PsiBlast_PDB 93.1291% -83 - C9 -2G78 5.7 RABP2_HUMAN
30 PsiBlast_CBE 92.4890% -84 - C9 -3FA7 2.2 RABP2_HUMAN
31 PsiBlast_CBE 92.3789% -80 - C9 -3CWK 4.9 RABP2_HUMAN
13 PsiBlast_PDB 92.3391% -84 - C9 -2G79 6.3 RABP2_HUMAN
18 PsiBlast_PDB 92.1091% -82 - C9 -3CR6 3.7 RABP2_HUMAN
32 PsiBlast_CBE 92.0089% -77 - C9 -3FEK 3.0 RABP2_HUMAN
34 PsiBlast_CBE 91.8689% -83 - C9 -3FA6 3.2 RABP2_HUMAN
24 PsiBlast_CBE 91.7091% -83 - C9 -3FEL 2.7 RABP2_HUMAN
27 PsiBlast_CBE 91.6791% -80 - C9 -3D97 2.3 RABP2_HUMAN
29 PsiBlast_CBE 91.3190% -81 - C9 -3FA7 2.6 RABP2_HUMAN
37 PsiBlast_CBE 91.2589% -80 - C9 -4I9S 5.6 RABP2_HUMAN
38 PsiBlast_CBE 90.9389% -81 - C9 -4M7M 5.1 RABP2_HUMAN
33 PsiBlast_CBE 90.6889% -82 - C9 -3FA6 3.0 RABP2_HUMAN
25 PsiBlast_CBE 90.2291% -80 - C9 -3F9D 3.8 RABP2_HUMAN
39 PsiBlast_CBE 89.6189% -76 - C9 -4M6S 5.6 RABP2_HUMAN
36 PsiBlast_CBE 88.9490% -79 - C9 -3F8A 3.1 RABP2_HUMAN
40 PsiBlast_CBE 88.8289% -77 - C9 -4I9R 5.0 RABP2_HUMAN
35 PsiBlast_CBE 88.1690% -74 - C9 -3FEP 4.3 RABP2_HUMAN
41 PsiBlast_CBE 87.6172% -75 - C9 -2CBR 6.5 RABP1_BOVIN
43 PsiBlast_CBE 85.9272% -71 - C9 -1CBR 6.6 RABP1_MOUSE
42 PsiBlast_CBE 85.2272% -71 - C9 -1CBR 6.8 RABP1_MOUSE
61 HHSearch 73.5248% -67 * C9 *3PPT 5.5 ?
71 HHSearch 73.3645% -70 - C9 -3WBG 4.4 FABPH_HUMAN
75 HHSearch 72.6237% -71 - C9 -4A60 3.3 FABP9_HUMAN
58 HHSearch 72.5544% -74 - C9 -1FDQ 4.0 FABP7_HUMAN
64 HHSearch 68.1835% -69 - C9 -4AZQ 6.4 FABP5_MOUSE