@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00067_CP3A1_: (2014-08-13 )
MDLLSALTLETWVLLAVVLVLLYGFGTRTHGLFKKQGIPGPKPLPFFGTVLNYYMGLWKFDVECHKKYGKIWGLFDGQMPLFAITDTEMIKNVLVKECFSVFTNRRDFGPVGIMGKAVSVAKDEEWKRYRALLSPTFTSGRLKEMFPIIEQYGDILVKYLKQEAETGKPVTMKKVFGAYSMDVITSTSFGVNVDSLNNPKDPFVEKTKKLLRFDFFDPLFLSVVLFPFLTPIYEMLNICMFPKDSIEFFKKFVYRMKETRLDSVQKHRVDFLQLMMNAHNDSKDKESHTALSDMEITAQSIIFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERVCKKDVEINGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQIPLKLSRQGLLQPTKPIILKVVPRDEIITGS

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RIT_B_12(3NXU)
CP3A4_HUMAN
[Raw transfer]



RIT_A_8(3NXU)
CP3A4_HUMAN
[Raw transfer]



Z8Z_A_3(4I4G)
CP3A4_HUMAN
[Raw transfer]



RIT_A_8(3NXU)
CP3A4_HUMAN
[Raw transfer]



8AW_A_3(4K9X)
CP3A4_HUMAN
[Raw transfer]



Z9Z_A_3(4I4H)
CP3A4_HUMAN
[Raw transfer]



08Y_A_3(3UA1)
CP3A4_HUMAN
[Raw transfer]



HEM_A_3(1W0F)
CP3A4_HUMAN
[Raw transfer]



HEM_B_11(3NXU)
CP3A4_HUMAN
[Raw transfer]



HEM_A_2(3TJS)
CP3A4_HUMAN
[Raw transfer]



HEM_A_2(3UA1)
CP3A4_HUMAN
[Raw transfer]



HEM_A_2(4I4H)
CP3A4_HUMAN
[Raw transfer]



6AW_A_3(4K9V)
CP3A4_HUMAN
[Raw transfer]



HEM_A_7(3NXU)
CP3A4_HUMAN
[Raw transfer]



HEM_A_2(1TQN)
CP3A4_HUMAN
[Raw transfer]



HEM_A_2(4I3Q)
CP3A4_HUMAN
[Raw transfer]



GOL_A_8(4HGG)
CPXB_BACME
[Raw transfer]



HEM_A_3(1W0G)
CP3A4_HUMAN
[Raw transfer]



D0R_A_3(3TJS)
CP3A4_HUMAN
[Raw transfer]



HEM_A_2(4K9V)
CP3A4_HUMAN
[Raw transfer]



HEM_A_2(4I4G)
CP3A4_HUMAN
[Raw transfer]



HEM_A_2(4K9X)
CP3A4_HUMAN
[Raw transfer]



HEM_A_2(4K9T)
CP3A4_HUMAN
[Raw transfer]



1RD_A_4(4K9T)
CP3A4_HUMAN
[Raw transfer]



MYT_A_2(1W0G)
CP3A4_HUMAN
[Raw transfer]



HEM_A_2(4K9U)
CP3A4_HUMAN
[Raw transfer]



1RD_A_3(4K9T)
CP3A4_HUMAN
[Raw transfer]



5AW_A_4(4K9U)
CP3A4_HUMAN
[Raw transfer]



5AW_A_3(4K9U)
CP3A4_HUMAN
[Raw transfer]



SYN_A_4(4HGG)
CPXB_BACME
[Raw transfer]



SYN_A_4(4HGF)
CPXB_BACME
[Raw transfer]



DMS_B_10(3NXU)
CP3A4_HUMAN
[Raw transfer]



DMS_A_6(3NXU)
CP3A4_HUMAN
[Raw transfer]



STR_A_2(1W0F)
CP3A4_HUMAN
[Raw transfer]



DMS_A_3(3NXU)
CP3A4_HUMAN
[Raw transfer]
4 PsiBlast_PDB 97.9373%-112 - C4 -4I4G 12.4 CP3A4_HUMAN
1 PsiBlast_PDB 97.9373%-116 - C4 -3UA1 12.4 CP3A4_HUMAN
37 HHSearch 97.8374%-114 - C4 -3NXU 12.2 CP3A4_HUMAN
24 PsiBlast_CBE 97.6173%-114 - C4 -3NXU 12.3 CP3A4_HUMAN
8 PsiBlast_PDB 97.4473%-114 - C4 -4K9V 12.2 CP3A4_HUMAN
6 PsiBlast_PDB 97.4273%-114 - C4 -4K9T 12.4 CP3A4_HUMAN
5 PsiBlast_PDB 97.1973%-112 - C4 -4I4H 12.5 CP3A4_HUMAN
3 PsiBlast_PDB 96.9873%-113 - C4 -4I3Q 12.3 CP3A4_HUMAN
16 PsiBlast_PDB 96.8173%-109 - C4 -1TQN 12.6 CP3A4_HUMAN
2 PsiBlast_PDB 96.4373%-112 - C4 -3TJS 12.4 CP3A4_HUMAN
12 PsiBlast_PDB 96.2273%-111 - C4 -1W0F 12.3 CP3A4_HUMAN
7 PsiBlast_PDB 95.4573%-113 - C4 -4K9U 12.2 CP3A4_HUMAN
13 PsiBlast_PDB 94.5773%-109 - C4 -1W0G 12.1 CP3A4_HUMAN
10 PsiBlast_PDB 94.5373%-113 - C4 -4K9X 12.1 CP3A4_HUMAN
18 PsiBlast_PDB 58.1130% -82 - C4 -4HGG 3.7 CPXB_BACME
17 PsiBlast_PDB 58.0730% -82 - C4 -4HGF 3.8 CPXB_BACME