@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00067_CP51_M: (2014-08-13 )
MSAVALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDECGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPACVRYRRRTGV

Atome Classification :

(13 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CMW_A_3(2W0B)
CP51_MYCTU
[Raw transfer]




HEM_A_2(1E9X)
CP51_MYCTU
[Raw transfer]




HEM_A_2(1U13)
CP51_MYCTU
[Raw transfer]




HEM_A_2(1EA1)
CP51_MYCTU
[Raw transfer]




HEM_A_2(2W0B)
CP51_MYCTU
[Raw transfer]




5PS_A_4(4BY0)
?
[Raw transfer]




HEM_A_2(3KSW)
CP51_TRYCC
[Raw transfer]




TPF_A_3(3KHM)
CP51_TRYCC
[Raw transfer]




HEM_A_3(3JUS)
CP51A_HUMAN
[Raw transfer]




HEM_A_3(3LD6)
CP51A_HUMAN
[Raw transfer]




VNF_A_3(3KSW)
CP51_TRYCC
[Raw transfer]




HEM_A_2(3ZG3)
CP51_TRYCC
[Raw transfer]




TPF_A_4(2WUZ)
CP51_TRYCC
[Raw transfer]




HEM_A_2(3ZG2)
CP51_TRYCC
[Raw transfer]




HEM_A_2(3JUV)
CP51A_HUMAN
[Raw transfer]




PIM_A_3(1E9X)
CP51_MYCTU
[Raw transfer]




ECN_A_4(3JUS)
CP51A_HUMAN
[Raw transfer]




TPF_A_3(1EA1)
CP51_MYCTU
[Raw transfer]




UDO_A_3(3ZG2)
CP51_TRYCC
[Raw transfer]




OXY_A_4(4LXJ)
?
[Raw transfer]




2 PsiBlast_PDB 99.26100%-110 - C1 -1E9X 12.9 CP51_MYCTU
8 PsiBlast_PDB 98.6999%-112 - C1 -2W0B 12.8 CP51_MYCTU
1 PsiBlast_PDB 98.48100%-109 - C1 -1EA1 12.5 CP51_MYCTU
9 PsiBlast_PDB 97.9199%-110 - C1 -1U13 12.6 CP51_MYCTU
11 PsiBlast_PDB 75.5133%-104 - C1 -3JUS 12.1 CP51A_HUMAN
12 PsiBlast_PDB 74.8933%-104 - C1 -3JUV 11.2 CP51A_HUMAN
10 PsiBlast_PDB 74.7933%-104 - C1 -3LD6 12.4 CP51A_HUMAN
20 PsiBlast_PDB 73.0732%-107 - C1 -2WUZ 4.8 CP51_TRYCC
16 PsiBlast_PDB 72.4332%-104 - C1 -3ZG2 12.3 CP51_TRYCC
17 PsiBlast_PDB 72.2232%-105 - C1 -3ZG3 12.4 CP51_TRYCC
14 PsiBlast_PDB 71.8232%-103 - C1 -4BY0 5.4 ?
15 PsiBlast_PDB 70.9232%-109 - C1 -3KHM 4.5 CP51_TRYCC
19 PsiBlast_PDB 70.3632%-101 - C1 -3KSW 8.5 CP51_TRYCC