@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00068_PA21B_: (2014-08-14 )
MKLLVLAVLLTVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DHG_B_7(5P2P)
PA21B_PIG
[Raw transfer]




GEL_A_3(1MKV)
PA21B_BOVIN
[Raw transfer]




DHG_A_6(5P2P)
PA21B_PIG
[Raw transfer]




TUD_A_9(2B01)
PA21B_PIG
[Raw transfer]




NLA_A_2(4O1Y)
?
[Raw transfer]




TCH_A_8(2AZZ)
PA21B_PIG
[Raw transfer]




GLE_A_3(1FDK)
PA21B_BOVIN
[Raw transfer]




TUD_A_3(2B03)
PA21B_PIG
[Raw transfer]




CHO_A_2(2B04)
PA21B_PIG
[Raw transfer]




CHD_A_3(2AZY)
PA21B_PIG
[Raw transfer]




MJI_B_14(1Y6O)
PA21B_PIG
[Raw transfer]




MPD_A_3(1O3W)
PA21B_BOVIN
[Raw transfer]




MJI_A_13(1Y6O)
PA21B_PIG
[Raw transfer]




PLM_A_4(3QLM)
PA21B_PIG
[Raw transfer]




MPD_A_4(1VKQ)
PA21B_BOVIN
[Raw transfer]




MJI_A_10(1FX9)
PA21B_PIG
[Raw transfer]




MJI_A_10(1FXF)
PA21B_PIG
[Raw transfer]




GCH_A_4(2B00)
PA21B_PIG
[Raw transfer]




MJI_A_10(1FX9)
PA21B_PIG
[Raw transfer]




MJI_A_10(1FXF)
PA21B_PIG
[Raw transfer]




MPD_A_3(4BP2)
PA21B_BOVIN
[Raw transfer]




MRD_A_4(2BAX)
PA21B_BOVIN
[Raw transfer]




MJI_A_10(1HN4)
PA21B_PIG
[Raw transfer]




ANN_A_3(1O2E)
PA21B_BOVIN
[Raw transfer]




MRD_A_5(2ZP4)
PA21B_BOVIN
[Raw transfer]




MRD_A_4(1G4I)
PA21B_BOVIN
[Raw transfer]




DBW_A_5(3L30)
PA21B_PIG
[Raw transfer]




MPD_B_8(2BD1)
PA21B_BOVIN
[Raw transfer]




BER_A_4(4DBK)
PA21B_PIG
[Raw transfer]




ANN_A_10(2B96)
PA21B_BOVIN
[Raw transfer]




CAQ_A_4(3O4M)
PA21B_PIG
[Raw transfer]




MPD_A_4(1GH4)
PA21B_BOVIN
[Raw transfer]




G3P_A_8(4HG9)
PA2BB_GLOHA
[Raw transfer]




IPA_A_3(1GMZ)
PA2B3_BOTPI
[Raw transfer]




LPE_B_12(1L8S)
PA21B_PIG
[Raw transfer]




MPD_A_7(2BD1)
PA21B_BOVIN
[Raw transfer]




MRD_A_5(2ZP3)
PA21B_BOVIN
[Raw transfer]




MPD_D_4(1JLT)
PA2B_VIPAE
[Raw transfer]




CHAIN_B_2(3JQL)
PA2A3_NAJSG
[Raw transfer]

-

MPD_A_7(1G4I)
PA21B_BOVIN
[Raw transfer]




MPD_A_8(2BCH)
PA21B_BOVIN
[Raw transfer]




EDO_A_3(3V9M)
PA2BB_PSEAU
[Raw transfer]




MRD_A_7(2BAX)
PA21B_BOVIN
[Raw transfer]




MPD_A_8(1VL9)
PA21B_BOVIN
[Raw transfer]




CHAIN_B_2(2G58)
PA2B8_DABRR
[Raw transfer]

-

OSF_A_7(3FVI)
PA21B_PIG
[Raw transfer]




DB7_A_6(4G5I)
PA21B_PIG
[Raw transfer]




CIT_A_6(4HG9)
PA2BB_GLOHA
[Raw transfer]




TRS_A_4(2ZP3)
PA21B_BOVIN
[Raw transfer]




LPE_B_12(1L8S)
PA21B_PIG
[Raw transfer]




MPD_A_3(1BP2)
PA21B_BOVIN
[Raw transfer]




MRD_A_5(1VL9)
PA21B_BOVIN
[Raw transfer]




MPD_A_10(1VL9)
PA21B_BOVIN
[Raw transfer]




OSF_B_9(3FVI)
PA21B_PIG
[Raw transfer]




OSF_A_7(3FVI)
PA21B_PIG
[Raw transfer]




MPD_A_8(2BAX)
PA21B_BOVIN
[Raw transfer]




2 PsiBlast_PDB 87.6981%-121 - C7 -1HN4 7.1 PA21B_PIG
23 PsiBlast_CBE 87.3481%-127 - C7 -4DBK 4.8 PA21B_PIG
10 PsiBlast_PDB 86.1081%-136 - C7 -2B03 8.1 PA21B_PIG
7 PsiBlast_PDB 85.4281%-128 - C7 -2AZZ 6.7 PA21B_PIG
3 PsiBlast_PDB 85.1481%-124 - C7 -1FX9 4.0 PA21B_PIG
22 PsiBlast_CBE 85.1181%-124 - C7 -4G5I 3.0 PA21B_PIG
25 PsiBlast_CBE 84.9581%-127 - C7 -3O4M 2.9 PA21B_PIG
31 PsiBlast_CBE 84.8581%-127 - C7 -1FXF 4.0 PA21B_PIG
11 PsiBlast_PDB 84.5981%-132 - C7 -2B04 7.7 PA21B_PIG
19 PsiBlast_PDB 84.5881%-123 - C7 -3L30 3.6 PA21B_PIG
8 PsiBlast_PDB 84.3881%-126 - C7 -2B00 6.8 PA21B_PIG
21 PsiBlast_CBE 84.0481%-121 - C7 -4O1Y 4.3 ?
37 PsiBlast_CBE 83.8480%-114 - C7 -1Y6O 4.5 PA21B_PIG
24 PsiBlast_CBE 83.6181%-122 - C7 -3QLM 4.2 PA21B_PIG
5 PsiBlast_PDB 83.3381%-126 - C7 -1L8S 1.9 PA21B_PIG
9 PsiBlast_PDB 83.2281%-133 - C7 -2B01 8.0 PA21B_PIG
29 PsiBlast_CBE 82.8881%-118 - C7 -3FVI 2.2 PA21B_PIG
53 PsiBlast_CBE 82.7977%-115 - C7 -1VKQ 3.6 PA21B_BOVIN
4 PsiBlast_PDB 82.6981%-121 - C7 -1FXF 3.0 PA21B_PIG
32 PsiBlast_CBE 82.6281%-122 - C7 -1FX9 4.9 PA21B_PIG
30 PsiBlast_CBE 82.5181%-122 - C7 -1L8S 4.4 PA21B_PIG
38 PsiBlast_CBE 82.5080%-112 - C7 -1Y6O 4.1 PA21B_PIG
54 PsiBlast_CBE 82.4277%-110 - C7 -1O3W 3.4 PA21B_BOVIN
28 PsiBlast_CBE 82.0981%-115 - C7 -3FVI - PA21B_PIG
20 PsiBlast_PDB 82.0781%-117 - C7 -3FVI 4.0 PA21B_PIG
49 PsiBlast_CBE 82.0078%-121 - C7 -2ZP3 3.8 PA21B_BOVIN
57 PsiBlast_CBE 81.7678%-120 - C7 -2BAX 3.6 PA21B_BOVIN
55 PsiBlast_CBE 81.6277%-110 - C7 -1O2E 3.5 PA21B_BOVIN
45 PsiBlast_CBE 81.6279%-117 - C7 -1FDK 5.1 PA21B_BOVIN
72 PsiBlast_CBE 81.5674%-122 - C7 -5P2P 6.9 PA21B_PIG
6 PsiBlast_PDB 81.2781%-128 - C7 -2AZY 6.6 PA21B_PIG
63 PsiBlast_CBE 80.4778%-117 - C7 -2BD1 3.1 PA21B_BOVIN
65 PsiBlast_CBE 80.3978%-117 - C7 -2BCH 3.2 PA21B_BOVIN
42 PsiBlast_CBE 80.3879%-112 - C7 -1MKV 7.3 PA21B_BOVIN
27 PsiBlast_CBE 80.2581%-116 - C7 -3FVI 2.4 PA21B_PIG
86 HHSearch 80.1579%-113 - C7 -1G4I 3.1 PA21B_BOVIN
60 PsiBlast_CBE 79.8278%-119 - C7 -2ZP4 2.7 PA21B_BOVIN
66 PsiBlast_CBE 79.7678%-119 - C7 -2B96 3.5 PA21B_BOVIN
73 PsiBlast_CBE 79.6574%-117 - C7 -5P2P 8.0 PA21B_PIG
64 PsiBlast_CBE 79.4678%-114 - C7 -2BD1 3.2 PA21B_BOVIN
39 PsiBlast_CBE 79.4177%-125 - C7 -4BP2 2.9 PA21B_BOVIN
46 PsiBlast_CBE 78.9779%-112 - C7 -1BP2 2.9 PA21B_BOVIN
67 PsiBlast_CBE 78.4678%-115 - C7 -1VL9 3.7 PA21B_BOVIN
62 PsiBlast_CBE 77.2578%-120 - C7 -1GH4 3.0 PA21B_BOVIN
90 HHSearch 76.3554%-123 - C7 -3JQL 5.1 PA2A3_NAJSG
92 HHSearch 72.8556%-103 - C7 -3V9M 2.1 PA2BB_PSEAU
105 HHSearch 69.4945%-118 - C7 -1GMZ 2.5 PA2B3_BOTPI
103 HHSearch 69.3246%-123 - C7 -1JLT 2.6 PA2B_VIPAE
99 HHSearch 68.6742%-109 - C7 -2G58 2.4 PA2B8_DABRR
100 HHSearch 65.7942%-102 - C7 -4HG9 3.3 PA2BB_GLOHA