@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00068_PA21B_: (2014-08-14 )
MKFLVLAVLLTVGAAQEGISSRALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DHG_B_7(5P2P)
PA21B_PIG
[Raw transfer]




DHG_A_6(5P2P)
PA21B_PIG
[Raw transfer]




NLA_A_2(4O1Y)
?
[Raw transfer]




GEL_A_3(1MKV)
PA21B_BOVIN
[Raw transfer]




CAQ_A_4(3O4M)
PA21B_PIG
[Raw transfer]




PLM_A_4(3QLM)
PA21B_PIG
[Raw transfer]




TUD_A_9(2B01)
PA21B_PIG
[Raw transfer]




MJI_A_10(1HN4)
PA21B_PIG
[Raw transfer]




CHO_A_2(2B04)
PA21B_PIG
[Raw transfer]




MJI_A_10(1FXF)
PA21B_PIG
[Raw transfer]




MJI_A_10(1FX9)
PA21B_PIG
[Raw transfer]




MPD_A_3(1O3W)
PA21B_BOVIN
[Raw transfer]




MPD_A_4(1VKQ)
PA21B_BOVIN
[Raw transfer]




MRD_A_4(1G4I)
PA21B_BOVIN
[Raw transfer]




TUD_A_3(2B03)
PA21B_PIG
[Raw transfer]




MRD_A_5(2ZP4)
PA21B_BOVIN
[Raw transfer]




TCH_A_8(2AZZ)
PA21B_PIG
[Raw transfer]




GCH_A_4(2B00)
PA21B_PIG
[Raw transfer]




ANN_A_3(1O2E)
PA21B_BOVIN
[Raw transfer]




MRD_A_4(2BAX)
PA21B_BOVIN
[Raw transfer]




CHD_A_3(2AZY)
PA21B_PIG
[Raw transfer]




MPD_A_4(1GH4)
PA21B_BOVIN
[Raw transfer]




MJI_B_14(1Y6O)
PA21B_PIG
[Raw transfer]




MPD_A_3(4BP2)
PA21B_BOVIN
[Raw transfer]




LPE_B_12(1L8S)
PA21B_PIG
[Raw transfer]




MPD_B_8(2BD1)
PA21B_BOVIN
[Raw transfer]




BER_A_4(4DBK)
PA21B_PIG
[Raw transfer]




ANN_A_10(2B96)
PA21B_BOVIN
[Raw transfer]




MJI_A_10(1FX9)
PA21B_PIG
[Raw transfer]




MJI_A_10(1FXF)
PA21B_PIG
[Raw transfer]




DBW_A_5(3L30)
PA21B_PIG
[Raw transfer]




GLE_A_3(1FDK)
PA21B_BOVIN
[Raw transfer]




MPD_A_7(2BD1)
PA21B_BOVIN
[Raw transfer]




MRD_A_5(2ZP3)
PA21B_BOVIN
[Raw transfer]




MJI_A_13(1Y6O)
PA21B_PIG
[Raw transfer]




OSF_D_20(3FVI)
PA21B_PIG
[Raw transfer]




MPD_A_7(1G4I)
PA21B_BOVIN
[Raw transfer]




IPA_A_3(1GMZ)
PA2B3_BOTPI
[Raw transfer]




G3P_A_8(4HG9)
PA2BB_GLOHA
[Raw transfer]




CHAIN_B_2(3JQL)
PA2A3_NAJSG
[Raw transfer]

-

DB7_A_6(4G5I)
PA21B_PIG
[Raw transfer]




OSF_A_7(3FVI)
PA21B_PIG
[Raw transfer]




MPD_D_4(1JLT)
PA2B_VIPAE
[Raw transfer]




EDO_A_3(3V9M)
PA2BB_PSEAU
[Raw transfer]




OSF_C_14(3FVI)
PA21B_PIG
[Raw transfer]




MPD_A_3(1BP2)
PA21B_BOVIN
[Raw transfer]




LPE_B_12(1L8S)
PA21B_PIG
[Raw transfer]




OSF_A_7(3FVI)
PA21B_PIG
[Raw transfer]




TRS_A_4(2ZP3)
PA21B_BOVIN
[Raw transfer]




OSF_B_9(3FVI)
PA21B_PIG
[Raw transfer]




MPD_A_8(2BAX)
PA21B_BOVIN
[Raw transfer]




CHAIN_B_2(2G58)
PA2B8_DABRR
[Raw transfer]

-

MRD_A_5(1VL9)
PA21B_BOVIN
[Raw transfer]




MPD_A_10(1VL9)
PA21B_BOVIN
[Raw transfer]




1 PsiBlast_PDB 96.06100%-127 - C6 -1HN4 8.2 PA21B_PIG
29 PsiBlast_CBE 92.53100%-121 - C6 -1L8S 4.7 PA21B_PIG
30 PsiBlast_CBE 91.93100%-124 - C6 -1FXF 4.3 PA21B_PIG
23 PsiBlast_CBE 91.84100%-124 - C6 -4DBK 5.0 PA21B_PIG
21 PsiBlast_CBE 91.29100%-122 - C6 -4O1Y 4.4 ?
2 PsiBlast_PDB 91.09100%-122 - C6 -1FX9 3.5 PA21B_PIG
4 PsiBlast_PDB 90.31100%-126 - C6 -1L8S 1.9 PA21B_PIG
3 PsiBlast_PDB 90.12100%-121 - C6 -1FXF 2.9 PA21B_PIG
24 PsiBlast_CBE 89.54100%-119 - C6 -3QLM 4.1 PA21B_PIG
18 PsiBlast_PDB 89.47100%-122 - C6 -3L30 4.2 PA21B_PIG
9 PsiBlast_PDB 89.26100%-130 - C6 -2B03 7.9 PA21B_PIG
19 PsiBlast_PDB 89.09100%-118 - C6 -3FVI 3.8 PA21B_PIG
31 PsiBlast_CBE 88.91100%-118 - C6 -1FX9 4.9 PA21B_PIG
28 PsiBlast_CBE 88.77100%-117 - C6 -3FVI 2.5 PA21B_PIG
25 PsiBlast_CBE 88.72100%-123 - C6 -3O4M 3.0 PA21B_PIG
8 PsiBlast_PDB 88.50100%-129 - C6 -2B01 8.4 PA21B_PIG
22 PsiBlast_CBE 88.46100%-122 - C6 -4G5I 3.4 PA21B_PIG
36 PsiBlast_CBE 88.0197%-119 - C6 -1Y6O 4.5 PA21B_PIG
40 PsiBlast_CBE 87.7291%-127 - C6 -5P2P 7.8 PA21B_PIG
27 PsiBlast_CBE 87.18100%-115 - C6 -3FVI - PA21B_PIG
37 PsiBlast_CBE 86.8297%-118 - C6 -1Y6O 4.4 PA21B_PIG
5 PsiBlast_PDB 86.80100%-121 - C6 -2AZY 6.9 PA21B_PIG
6 PsiBlast_PDB 86.57100%-120 - C6 -2AZZ 6.9 PA21B_PIG
10 PsiBlast_PDB 86.42100%-126 - C6 -2B04 8.0 PA21B_PIG
7 PsiBlast_PDB 85.84100%-119 - C6 -2B00 7.1 PA21B_PIG
26 PsiBlast_CBE 85.52100%-118 - C6 -3FVI 2.4 PA21B_PIG
41 PsiBlast_CBE 85.4391%-121 - C6 -5P2P 8.9 PA21B_PIG
53 PsiBlast_CBE 84.0583%-120 - C6 -2ZP3 3.2 PA21B_BOVIN
49 PsiBlast_CBE 83.4584%-118 - C6 -1FDK 4.8 PA21B_BOVIN
69 PsiBlast_CBE 82.8384%-120 - C6 -2B96 3.6 PA21B_BOVIN
46 PsiBlast_CBE 82.2984%-114 - C6 -1MKV 8.1 PA21B_BOVIN
50 PsiBlast_CBE 81.3584%-113 - C6 -1BP2 2.9 PA21B_BOVIN
59 PsiBlast_CBE 81.2083%-119 - C6 -2ZP4 2.7 PA21B_BOVIN
66 PsiBlast_CBE 81.0384%-124 - C6 -1GH4 3.1 PA21B_BOVIN
85 HHSearch 80.7284%-114 - C6 -1G4I 3.1 PA21B_BOVIN
70 PsiBlast_CBE 80.0984%-115 - C6 -1VL9 3.7 PA21B_BOVIN
43 PsiBlast_CBE 79.9982%-124 - C6 -4BP2 2.6 PA21B_BOVIN
71 PsiBlast_CBE 79.8484%-118 - C6 -2BD1 3.2 PA21B_BOVIN
63 PsiBlast_CBE 78.3783%-115 - C6 -1O2E 3.4 PA21B_BOVIN
72 PsiBlast_CBE 78.2784%-116 - C6 -2BD1 3.3 PA21B_BOVIN
73 PsiBlast_CBE 78.1784%-114 - C6 -2BCH - PA21B_BOVIN
61 PsiBlast_CBE 77.8983%-119 - C6 -1VKQ 3.6 PA21B_BOVIN
64 PsiBlast_CBE 76.9683%-117 - C6 -2BAX 3.5 PA21B_BOVIN
62 PsiBlast_CBE 76.6383%-118 - C6 -1O3W 3.4 PA21B_BOVIN
90 HHSearch 76.4258%-124 - C6 -3JQL 4.7 PA2A3_NAJSG
92 HHSearch 70.3256%-106 - C6 -3V9M 2.0 PA2BB_PSEAU
105 HHSearch 69.2448%-122 - C6 -1JLT 2.7 PA2B_VIPAE
103 HHSearch 67.3445%-122 - C6 -1GMZ 2.6 PA2B3_BOTPI
99 HHSearch 65.6142%-115 - C6 -2G58 1.7 PA2B8_DABRR
100 HHSearch 62.9842%-101 - C6 -4HG9 2.5 PA2BB_GLOHA