@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00068_PA21B_: (2014-08-14 )
MKLLLLAALLTAGVTAHSISTRAVWQFRNMIKCTIPGSDPLREYNNYGCYCGLGGSGTPVDDLDRCCQTHDHCYNQAKKLESCKFLIDNPYTNTYSYKCSGNVITCSDKNNDCESFICNCDRQAAICFSKVPYNKEYKDLDTKKHC

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GEL_A_3(1MKV)
PA21B_BOVIN
[Raw transfer]




NLA_A_2(4O1Y)
?
[Raw transfer]




MRD_A_5(2ZP4)
PA21B_BOVIN
[Raw transfer]




TUD_A_9(2B01)
PA21B_PIG
[Raw transfer]




MJI_A_10(1FXF)
PA21B_PIG
[Raw transfer]




MJI_A_10(1FX9)
PA21B_PIG
[Raw transfer]




MJI_A_10(1HN4)
PA21B_PIG
[Raw transfer]




BER_A_4(4DBK)
PA21B_PIG
[Raw transfer]




DBW_A_5(3L30)
PA21B_PIG
[Raw transfer]




LPE_B_12(1L8S)
PA21B_PIG
[Raw transfer]




PLM_A_4(3QLM)
PA21B_PIG
[Raw transfer]




GCH_A_4(2B00)
PA21B_PIG
[Raw transfer]




CHO_A_2(2B04)
PA21B_PIG
[Raw transfer]




OSF_D_20(3FVI)
PA21B_PIG
[Raw transfer]




MPD_A_4(1GH4)
PA21B_BOVIN
[Raw transfer]




TCH_A_8(2AZZ)
PA21B_PIG
[Raw transfer]




MPD_A_7(2BD1)
PA21B_BOVIN
[Raw transfer]




MJI_A_10(1FXF)
PA21B_PIG
[Raw transfer]




MPD_B_8(2BD1)
PA21B_BOVIN
[Raw transfer]




MJI_B_14(1Y6O)
PA21B_PIG
[Raw transfer]




TUD_A_3(2B03)
PA21B_PIG
[Raw transfer]




MRD_A_4(1G4I)
PA21B_BOVIN
[Raw transfer]




CHD_A_3(2AZY)
PA21B_PIG
[Raw transfer]




MJI_A_10(1FX9)
PA21B_PIG
[Raw transfer]




MRD_A_5(2ZP3)
PA21B_BOVIN
[Raw transfer]




MPD_A_4(1VKQ)
PA21B_BOVIN
[Raw transfer]




MPD_A_7(1G4I)
PA21B_BOVIN
[Raw transfer]




MRD_A_4(2BAX)
PA21B_BOVIN
[Raw transfer]




MPD_A_3(1O3W)
PA21B_BOVIN
[Raw transfer]




MJI_A_13(1Y6O)
PA21B_PIG
[Raw transfer]




MPD_A_3(4BP2)
PA21B_BOVIN
[Raw transfer]




CHAIN_B_2(3JQL)
PA2A3_NAJSG
[Raw transfer]

-

CAQ_A_4(3O4M)
PA21B_PIG
[Raw transfer]




GLE_A_3(1FDK)
PA21B_BOVIN
[Raw transfer]




ANN_A_3(1O2E)
PA21B_BOVIN
[Raw transfer]




DB7_A_6(4G5I)
PA21B_PIG
[Raw transfer]




G3P_A_8(4HG9)
PA2BB_GLOHA
[Raw transfer]




ANN_A_10(2B96)
PA21B_BOVIN
[Raw transfer]




OSF_C_13(3FVI)
PA21B_PIG
[Raw transfer]




MRD_A_7(2BAX)
PA21B_BOVIN
[Raw transfer]




EDO_A_3(3V9M)
PA2BB_PSEAU
[Raw transfer]




OSF_A_7(3FVI)
PA21B_PIG
[Raw transfer]




MPD_A_8(1VL9)
PA21B_BOVIN
[Raw transfer]




MJI_B_14(1Y6O)
PA21B_PIG
[Raw transfer]




OSF_B_9(3FVI)
PA21B_PIG
[Raw transfer]




IPA_A_3(1GMZ)
PA2B3_BOTPI
[Raw transfer]




CHAIN_B_2(2G58)
PA2B8_DABRR
[Raw transfer]

-

LPE_B_12(1L8S)
PA21B_PIG
[Raw transfer]




MPD_D_4(1JLT)
PA2B_VIPAE
[Raw transfer]




TRS_A_4(2ZP3)
PA21B_BOVIN
[Raw transfer]




MPD_A_3(1BP2)
PA21B_BOVIN
[Raw transfer]




MRD_A_5(1VL9)
PA21B_BOVIN
[Raw transfer]




MRD_A_5(2BAX)
PA21B_BOVIN
[Raw transfer]




MPD_A_10(1VL9)
PA21B_BOVIN
[Raw transfer]




MPD_A_8(2BAX)
PA21B_BOVIN
[Raw transfer]




OSF_A_7(3FVI)
PA21B_PIG
[Raw transfer]




11 PsiBlast_PDB 92.1375%-119 - C8 -2B01 8.3 PA21B_PIG
13 PsiBlast_PDB 91.7475%-121 - C8 -2B04 7.7 PA21B_PIG
23 PsiBlast_CBE 91.5875%-112 - C8 -4DBK 4.7 PA21B_PIG
33 PsiBlast_CBE 91.0975%-113 - C8 -1FXF 4.0 PA21B_PIG
5 PsiBlast_PDB 91.0275%-108 - C8 -1FX9 3.9 PA21B_PIG
9 PsiBlast_PDB 90.6475%-111 - C8 -2AZZ 6.9 PA21B_PIG
26 PsiBlast_CBE 90.6375%-111 - C8 -3L30 3.6 PA21B_PIG
7 PsiBlast_PDB 90.3175%-112 - C8 -1L8S 1.9 PA21B_PIG
2 PsiBlast_PDB 90.3174%-110 - C8 -1HN4 7.1 PA21B_PIG
21 PsiBlast_CBE 90.2775%-106 - C8 -4O1Y 4.3 ?
12 PsiBlast_PDB 90.2375%-120 - C8 -2B03 7.7 PA21B_PIG
22 PsiBlast_CBE 90.2175%-110 - C8 -4G5I 3.1 PA21B_PIG
31 PsiBlast_CBE 89.9675%-103 - C8 -3FVI 3.6 PA21B_PIG
24 PsiBlast_CBE 89.9075%-108 - C8 -3QLM 4.2 PA21B_PIG
25 PsiBlast_CBE 89.5375%-113 - C8 -3O4M 2.9 PA21B_PIG
10 PsiBlast_PDB 89.4575%-110 - C8 -2B00 7.0 PA21B_PIG
51 PsiBlast_CBE 89.2775%-100 - C8 -1Y6O 4.3 PA21B_PIG
32 PsiBlast_CBE 89.0275%-106 - C8 -1L8S 4.3 PA21B_PIG
50 PsiBlast_CBE 88.9775%-100 - C8 -1Y6O 4.5 PA21B_PIG
34 PsiBlast_CBE 88.8775%-110 - C8 -1FX9 5.1 PA21B_PIG
6 PsiBlast_PDB 88.8175%-108 - C8 -1FXF 3.3 PA21B_PIG
46 PsiBlast_CBE 88.7477%-109 - C8 -2ZP3 3.2 PA21B_BOVIN
54 PsiBlast_CBE 88.6077%-108 - C8 -1VKQ 3.6 PA21B_BOVIN
30 PsiBlast_CBE 88.5875%-102 - C8 -3FVI 3.9 PA21B_PIG
56 PsiBlast_CBE 88.4877%-103 - C8 -1O2E 3.4 PA21B_BOVIN
40 PsiBlast_CBE 88.4678%-106 - C8 -1FDK 4.6 PA21B_BOVIN
61 PsiBlast_CBE 88.0977%-108 - C8 -2BAX 3.8 PA21B_BOVIN
55 PsiBlast_CBE 88.0977%-106 - C8 -1O3W 3.4 PA21B_BOVIN
37 PsiBlast_CBE 87.6678%-102 - C8 -1MKV 7.3 PA21B_BOVIN
70 PsiBlast_CBE 87.6478%-102 - C8 -1VL9 3.7 PA21B_BOVIN
60 PsiBlast_CBE 87.5877%-106 - C8 -2ZP4 2.6 PA21B_BOVIN
82 HHSearch 87.4278%-104 - C8 -1G4I 3.1 PA21B_BOVIN
69 PsiBlast_CBE 87.3278%-108 - C8 -2B96 3.6 PA21B_BOVIN
3 PsiBlast_PDB 87.2976%-113 - C8 -4BP2 2.8 PA21B_BOVIN
63 PsiBlast_CBE 86.8278%-107 - C8 -1GH4 3.0 PA21B_BOVIN
64 PsiBlast_CBE 86.6078%-103 - C8 -2BD1 3.1 PA21B_BOVIN
8 PsiBlast_PDB 86.5175%-112 - C8 -2AZY 6.5 PA21B_PIG
65 PsiBlast_CBE 86.5078%-101 - C8 -2BD1 3.2 PA21B_BOVIN
28 PsiBlast_CBE 86.5075%-101 - C8 -3FVI 2.4 PA21B_PIG
29 PsiBlast_CBE 86.4775%-101 - C8 -3FVI - PA21B_PIG
66 PsiBlast_CBE 86.0878%-103 - C8 -2BCH - PA21B_BOVIN
41 PsiBlast_CBE 85.9778%-103 - C8 -1BP2 2.7 PA21B_BOVIN
87 HHSearch 83.8655%-111 - C8 -3JQL 4.7 PA2A3_NAJSG
90 HHSearch 79.0958% -95 - C8 -3V9M 2.1 PA2BB_PSEAU
101 HHSearch 77.0845%-115 - C8 -1GMZ 2.5 PA2B3_BOTPI
102 HHSearch 74.2648%-111 - C8 -1JLT 2.7 PA2B_VIPAE
96 HHSearch 72.0943%-103 - C8 -2G58 1.6 PA2B8_DABRR
97 HHSearch 69.9842% -94 - C8 -4HG9 2.3 PA2BB_GLOHA