@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00068_PA2GA_: (2014-08-14 )
MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GEL_B_8(1POE)
PA2GA_HUMAN
[Raw transfer]




8IN_A_4(1DB4)
PA2GA_HUMAN
[Raw transfer]




INB_C_21(1AYP)
PA2GA_HUMAN
[Raw transfer]




INB_D_22(1AYP)
PA2GA_HUMAN
[Raw transfer]




BHP_A_7(1J1A)
PA2GA_HUMAN
[Raw transfer]




INB_F_24(1AYP)
PA2GA_HUMAN
[Raw transfer]




OAP_C_21(1KVO)
PA2GA_HUMAN
[Raw transfer]




INB_B_20(1AYP)
PA2GA_HUMAN
[Raw transfer]




GEL_A_7(1POE)
PA2GA_HUMAN
[Raw transfer]




OAP_A_19(1KVO)
PA2GA_HUMAN
[Raw transfer]




U8D_B_8(3U8D)
PA2GA_HUMAN
[Raw transfer]




BHP_B_8(1J1A)
PA2GA_HUMAN
[Raw transfer]




OAP_D_22(1KVO)
PA2GA_HUMAN
[Raw transfer]




BR4_A_4(1KQU)
PA2GA_HUMAN
[Raw transfer]




BHP_A_3(3U8H)
PA2GA_HUMAN
[Raw transfer]




OAP_F_24(1KVO)
PA2GA_HUMAN
[Raw transfer]




OAP_E_23(1KVO)
PA2GA_HUMAN
[Raw transfer]




6IN_A_4(1DB5)
PA2GA_HUMAN
[Raw transfer]




INB_A_19(1AYP)
PA2GA_HUMAN
[Raw transfer]




I3N_A_4(1DCY)
PA2GA_HUMAN
[Raw transfer]




OAP_B_20(1KVO)
PA2GA_HUMAN
[Raw transfer]




DAO_A_3(2QHD)
PA2HS_ECHCA
[Raw transfer]




BOG_A_5(1C1J)
PA2BB_GLOHA
[Raw transfer]




BOG_E_5(1B4W)
PA2BB_GLOHA
[Raw transfer]




MPD_D_4(1JLT)
PA2B_VIPAE
[Raw transfer]




G3P_A_8(4HG9)
PA2BB_GLOHA
[Raw transfer]




IPA_A_3(1GMZ)
PA2B3_BOTPI
[Raw transfer]




G3P_A_8(4HG9)
PA2BB_GLOHA
[Raw transfer]




CHAIN_B_2(3JQL)
PA2A3_NAJSG
[Raw transfer]

-

EDO_A_3(3V9M)
PA2BB_PSEAU
[Raw transfer]




BHP_B_8(1J1A)
PA2GA_HUMAN
[Raw transfer]




CHAIN_B_2(2G58)
PA2B8_DABRR
[Raw transfer]

-

BHP_A_7(1J1A)
PA2GA_HUMAN
[Raw transfer]




MRD_C_3(1JLT)
PA2AI_VIPAE
[Raw transfer]




BHP_A_3(3U8H)
PA2GA_HUMAN
[Raw transfer]




U8D_A_3(3U8D)
PA2GA_HUMAN
[Raw transfer]




MPD_D_4(1JLT)
PA2AI_VIPAE
[Raw transfer]




MRD_C_3(1JLT)
PA2B_VIPAE
[Raw transfer]




24 PsiBlast_CBE 95.09100% -94 - C6 -1KVO 10.2 PA2GA_HUMAN
3 PsiBlast_PDB 94.79100% -96 - C6 -1KVO 10.1 PA2GA_HUMAN
19 PsiBlast_CBE 93.88100% -91 - C6 -3U8D 9.0 PA2GA_HUMAN
7 PsiBlast_PDB 93.83100% -87 - C6 -1J1A 9.7 PA2GA_HUMAN
5 PsiBlast_PDB 93.67100% -89 - C6 -1DB4 8.7 PA2GA_HUMAN
26 PsiBlast_CBE 93.62100% -90 - C6 -1J1A 9.3 PA2GA_HUMAN
8 PsiBlast_PDB 93.58100% -87 - C6 -1KQU 9.5 PA2GA_HUMAN
4 PsiBlast_PDB 93.53100% -88 - C6 -1DCY 7.4 PA2GA_HUMAN
11 PsiBlast_PDB 93.31100% -86 - C6 -3U8H 9.4 PA2GA_HUMAN
22 PsiBlast_CBE 93.13100% -93 - C6 -1KVO 10.5 PA2GA_HUMAN
21 PsiBlast_CBE 93.11100% -88 - C6 -1KVO 10.2 PA2GA_HUMAN
18 PsiBlast_CBE 93.11100% -87 - C6 -3U8H 2.9 PA2GA_HUMAN
6 PsiBlast_PDB 92.70100% -90 - C6 -1DB5 8.2 PA2GA_HUMAN
23 PsiBlast_CBE 92.41100% -92 - C6 -1KVO 10.1 PA2GA_HUMAN
25 PsiBlast_CBE 92.27100% -91 - C6 -1KVO 10.5 PA2GA_HUMAN
20 PsiBlast_CBE 91.92100% -76 - C6 -1POE 7.5 PA2GA_HUMAN
29 PsiBlast_CBE 91.26100% -89 - C6 -1AYP 8.5 PA2GA_HUMAN
31 PsiBlast_CBE 90.84100% -88 - C6 -1AYP 9.3 PA2GA_HUMAN
2 PsiBlast_PDB 90.12100% -92 - C6 -1AYP 8.3 PA2GA_HUMAN
27 PsiBlast_CBE 89.96100% -83 - C6 -1AYP 9.1 PA2GA_HUMAN
30 PsiBlast_CBE 89.77100% -87 - C6 -1AYP 9.7 PA2GA_HUMAN
1 PsiBlast_PDB 89.60100% -79 - C6 -1POE 8.1 PA2GA_HUMAN
28 PsiBlast_CBE 89.08100% -91 - C6 -1AYP - PA2GA_HUMAN
53 HHSearch 81.6348% -87 - C6 -2QHD 3.8 PA2HS_ECHCA
16 PsiBlast_PDB 80.6650% -86 - C6 -1B4W 3.6 PA2BB_GLOHA
59 HHSearch 80.2351% -95 - C6 -2G58 1.7 PA2B8_DABRR
47 HHSearch 79.0748% -82 - C6 -1JLT 3.3 PA2AI_VIPAE
43 HHSearch 79.0451% -79 - C6 -4HG9 1.9 PA2BB_GLOHA
17 PsiBlast_PDB 77.8149% -77 - C6 -1C1J 3.6 PA2BB_GLOHA
51 HHSearch 76.9251% -92 - C6 -1GMZ 2.5 PA2B3_BOTPI
49 HHSearch 76.7848% -88 - C6 -1JLT 3.5 PA2B_VIPAE
63 HHSearch 67.3942% -70 - C6 -3V9M 2.9 PA2BB_PSEAU
61 HHSearch 67.1639% -83 - C6 -3JQL 4.5 PA2A3_NAJSG