@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00068_PA2GA_: (2014-08-14 )
MKVLLLLAASIMAFGSIQVQGNIAQFGEMIRLKTGKRAELSYAFYGCHCGLGGKGSPKDATDRCCVTHDCCYKSLEKSGCGTKLLKYKYSHQGGQITCSANQNSCQKRLCQCDKAAAECFARNKKTYSLKYQFYPNMFCKGKKPKC

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

8IN_A_4(1DB4)
PA2GA_HUMAN
[Raw transfer]




BHP_A_7(1J1A)
PA2GA_HUMAN
[Raw transfer]




GEL_A_7(1POE)
PA2GA_HUMAN
[Raw transfer]




BR4_A_4(1KQU)
PA2GA_HUMAN
[Raw transfer]




BHP_A_3(3U8H)
PA2GA_HUMAN
[Raw transfer]




6IN_A_4(1DB5)
PA2GA_HUMAN
[Raw transfer]




INB_A_19(1AYP)
PA2GA_HUMAN
[Raw transfer]




OAP_A_19(1KVO)
PA2GA_HUMAN
[Raw transfer]




I3N_A_4(1DCY)
PA2GA_HUMAN
[Raw transfer]




DAO_A_3(2QHD)
PA2HS_ECHCA
[Raw transfer]




BOG_A_5(1C1J)
PA2BB_GLOHA
[Raw transfer]




BOG_E_5(1B4W)
PA2BB_GLOHA
[Raw transfer]




MPD_D_4(1JLT)
PA2B_VIPAE
[Raw transfer]




IPA_A_3(1GMZ)
PA2B3_BOTPI
[Raw transfer]




G3P_A_8(4HG9)
PA2BB_GLOHA
[Raw transfer]




EDO_A_3(3V9M)
PA2BB_PSEAU
[Raw transfer]




CHAIN_B_2(2G58)
PA2B8_DABRR
[Raw transfer]

-

CHAIN_B_2(3JQL)
PA2A3_NAJSG
[Raw transfer]

-

MRD_C_3(1JLT)
PA2AI_VIPAE
[Raw transfer]




PEG_A_8(3V9M)
PA2BB_PSEAU
[Raw transfer]




3 PsiBlast_PDB 95.3768% -79 - C4 -1KVO 8.7 PA2GA_HUMAN
6 PsiBlast_PDB 93.7868% -72 - C4 -1DB5 7.8 PA2GA_HUMAN
8 PsiBlast_PDB 93.7368% -71 - C4 -1KQU 8.6 PA2GA_HUMAN
5 PsiBlast_PDB 93.1068% -73 - C4 -1DB4 8.3 PA2GA_HUMAN
4 PsiBlast_PDB 92.6268% -72 - C4 -1DCY 6.8 PA2GA_HUMAN
7 PsiBlast_PDB 92.5068% -68 - C4 -1J1A 9.6 PA2GA_HUMAN
11 PsiBlast_PDB 91.4368% -67 - C4 -3U8H 9.1 PA2GA_HUMAN
1 PsiBlast_PDB 89.7768% -66 - C4 -1POE 7.8 PA2GA_HUMAN
2 PsiBlast_PDB 87.7568% -73 - C4 -1AYP 7.1 PA2GA_HUMAN
49 HHSearch 85.2255% -78 - C4 -2G58 2.4 PA2B8_DABRR
42 HHSearch 84.4150% -75 - C4 -2QHD 3.9 PA2HS_ECHCA
16 PsiBlast_PDB 82.8951% -80 - C4 -1B4W 3.5 PA2BB_GLOHA
40 HHSearch 81.0249% -81 - C4 -1GMZ 2.5 PA2B3_BOTPI
14 PsiBlast_PDB 80.0651% -69 - C4 -4HG9 1.7 PA2BB_GLOHA
35 HHSearch 79.6945% -70 - C4 -1JLT 2.8 PA2AI_VIPAE
19 PsiBlast_PDB 79.2150% -70 - C4 -1C1J 3.9 PA2BB_GLOHA
37 HHSearch 77.3047% -74 - C4 -1JLT 2.6 PA2B_VIPAE
50 HHSearch 71.7840% -74 - C4 -3JQL 3.9 PA2A3_NAJSG
52 HHSearch 69.7744% -67 - C4 -3V9M 2.9 PA2BB_PSEAU