@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00068_PA2GA_: (2014-08-14 )
MKVLLLLAVVIMAFGSIQVQGSLLEFGQMILFKTGKRADVSYGFYGCHCGVGGRGSPKDATDWCCVTHDCCYNRLEKRGCGTKFLTYKFSYRGGQISCSTNQDSCRKQLCQCDKAAAECFARNKKSYSLKYQFYPNKFCKGKTPSC

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GEL_B_8(1POE)
PA2GA_HUMAN
[Raw transfer]




INB_C_21(1AYP)
PA2GA_HUMAN
[Raw transfer]




8IN_A_4(1DB4)
PA2GA_HUMAN
[Raw transfer]




OAP_D_22(1KVO)
PA2GA_HUMAN
[Raw transfer]




OAP_C_21(1KVO)
PA2GA_HUMAN
[Raw transfer]




BR4_A_4(1KQU)
PA2GA_HUMAN
[Raw transfer]




BHP_A_7(1J1A)
PA2GA_HUMAN
[Raw transfer]




INB_E_23(1AYP)
PA2GA_HUMAN
[Raw transfer]




BHP_B_8(3U8H)
PA2GA_HUMAN
[Raw transfer]




U8D_B_8(3U8D)
PA2GA_HUMAN
[Raw transfer]




GEL_A_7(1POE)
PA2GA_HUMAN
[Raw transfer]




INB_F_24(1AYP)
PA2GA_HUMAN
[Raw transfer]




INB_B_20(1AYP)
PA2GA_HUMAN
[Raw transfer]




OAP_F_24(1KVO)
PA2GA_HUMAN
[Raw transfer]




6IN_A_4(1DB5)
PA2GA_HUMAN
[Raw transfer]




OAP_E_23(1KVO)
PA2GA_HUMAN
[Raw transfer]




BHP_A_3(3U8H)
PA2GA_HUMAN
[Raw transfer]




OAP_A_19(1KVO)
PA2GA_HUMAN
[Raw transfer]




INB_A_19(1AYP)
PA2GA_HUMAN
[Raw transfer]




OAP_B_20(1KVO)
PA2GA_HUMAN
[Raw transfer]




I3N_A_4(1DCY)
PA2GA_HUMAN
[Raw transfer]




DAO_A_3(2QHD)
PA2HS_ECHCA
[Raw transfer]




BOG_A_5(1C1J)
PA2BB_GLOHA
[Raw transfer]




MPD_D_4(1JLT)
PA2B_VIPAE
[Raw transfer]




BOG_E_5(1B4W)
PA2BB_GLOHA
[Raw transfer]




IPA_A_3(1GMZ)
PA2B3_BOTPI
[Raw transfer]




G3P_A_8(4HG9)
PA2BB_GLOHA
[Raw transfer]




G3P_A_8(4HG9)
PA2BB_GLOHA
[Raw transfer]




IPA_A_2(1MC2)
PA2H_DEIAC
[Raw transfer]




EDO_A_3(3V9M)
PA2BB_PSEAU
[Raw transfer]




MRD_C_3(1JLT)
PA2AI_VIPAE
[Raw transfer]




CHAIN_B_2(3JQL)
PA2A3_NAJSG
[Raw transfer]

-

BHP_A_7(1J1A)
PA2GA_HUMAN
[Raw transfer]




CHAIN_B_2(2G58)
PA2B8_DABRR
[Raw transfer]

-

BHP_A_3(3U8H)
PA2GA_HUMAN
[Raw transfer]




MPD_D_4(1JLT)
PA2AI_VIPAE
[Raw transfer]




U8D_A_3(3U8D)
PA2GA_HUMAN
[Raw transfer]




MRD_C_3(1JLT)
PA2B_VIPAE
[Raw transfer]




26 PsiBlast_CBE 93.6972% -98 - C8 -1KVO 9.0 PA2GA_HUMAN
4 PsiBlast_PDB 93.1572% -98 - C8 -1KVO 9.8 PA2GA_HUMAN
7 PsiBlast_PDB 91.7172% -93 - C8 -1DB5 8.0 PA2GA_HUMAN
20 PsiBlast_CBE 91.4572% -90 - C8 -3U8H 9.6 PA2GA_HUMAN
8 PsiBlast_PDB 91.1772% -87 - C8 -1J1A 9.1 PA2GA_HUMAN
28 PsiBlast_CBE 90.9772% -90 - C8 -1J1A 2.5 PA2GA_HUMAN
6 PsiBlast_PDB 90.6572% -95 - C8 -1DB4 8.5 PA2GA_HUMAN
24 PsiBlast_CBE 90.4872% -91 - C8 -1KVO 9.4 PA2GA_HUMAN
23 PsiBlast_CBE 90.1372% -94 - C8 -1KVO 9.6 PA2GA_HUMAN
21 PsiBlast_CBE 90.0672% -97 - C8 -3U8D 8.6 PA2GA_HUMAN
25 PsiBlast_CBE 89.9372% -91 - C8 -1KVO 9.8 PA2GA_HUMAN
5 PsiBlast_PDB 89.8972% -94 - C8 -1DCY 7.1 PA2GA_HUMAN
9 PsiBlast_PDB 89.8672% -87 - C8 -1KQU 9.0 PA2GA_HUMAN
27 PsiBlast_CBE 89.8572% -91 - C8 -1KVO 9.8 PA2GA_HUMAN
12 PsiBlast_PDB 89.7172% -89 - C8 -3U8H 9.0 PA2GA_HUMAN
31 PsiBlast_CBE 89.0972% -88 - C8 -1AYP - PA2GA_HUMAN
22 PsiBlast_CBE 88.9772% -83 - C8 -1POE 7.3 PA2GA_HUMAN
32 PsiBlast_CBE 88.5472% -88 - C8 -1AYP 9.4 PA2GA_HUMAN
30 PsiBlast_CBE 87.4572% -87 - C8 -1AYP 9.2 PA2GA_HUMAN
2 PsiBlast_PDB 86.8572% -87 - C8 -1POE 8.3 PA2GA_HUMAN
29 PsiBlast_CBE 86.0672% -85 - C8 -1AYP 6.9 PA2GA_HUMAN
3 PsiBlast_PDB 85.5672% -88 - C8 -1AYP 5.8 PA2GA_HUMAN
33 PsiBlast_CBE 84.8372% -89 - C8 -1AYP 6.5 PA2GA_HUMAN
55 HHSearch 82.8248% -94 - C8 -2QHD 3.7 PA2HS_ECHCA
61 HHSearch 81.6555%-101 - C8 -2G58 3.4 PA2B8_DABRR
16 PsiBlast_PDB 80.1650% -95 - C8 -1B4W 3.3 PA2BB_GLOHA
53 HHSearch 79.9451% -96 - C8 -1GMZ 2.4 PA2B3_BOTPI
18 PsiBlast_PDB 79.4550% -87 - C8 -1C1J 3.4 PA2BB_GLOHA
50 HHSearch 77.7143% -92 - C8 -1JLT 3.5 PA2B_VIPAE
45 HHSearch 77.2152% -83 - C8 -4HG9 1.9 PA2BB_GLOHA
48 HHSearch 76.3144% -88 - C8 -1JLT 3.3 PA2AI_VIPAE
46 HHSearch 74.2342% -82 - C8 -1MC2 2.4 PA2H_DEIAC
63 HHSearch 66.8838% -86 - C8 -3JQL 4.1 PA2A3_NAJSG
65 HHSearch 63.0640% -74 - C8 -3V9M 2.9 PA2BB_PSEAU