@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00068_PA2GX_: (2014-08-14 )
MGPLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPIAYMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDSPKCD

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MPD_B_8(1LE6)
PA2GX_HUMAN
[Raw transfer]




8IN_A_4(1DB4)
PA2GA_HUMAN
[Raw transfer]




BHP_A_7(1J1A)
PA2GA_HUMAN
[Raw transfer]




BR4_A_4(1KQU)
PA2GA_HUMAN
[Raw transfer]




BHP_A_3(3U8H)
PA2GA_HUMAN
[Raw transfer]




INB_A_19(1AYP)
PA2GA_HUMAN
[Raw transfer]




GEL_A_7(1POE)
PA2GA_HUMAN
[Raw transfer]




6IN_A_4(1DB5)
PA2GA_HUMAN
[Raw transfer]




OAP_A_19(1KVO)
PA2GA_HUMAN
[Raw transfer]




I3N_A_4(1DCY)
PA2GA_HUMAN
[Raw transfer]




DAO_A_3(2QHD)
PA2HS_ECHCA
[Raw transfer]




MPD_D_4(1JLT)
PA2B_VIPAE
[Raw transfer]




MPD_A_5(1LE7)
PA2GX_HUMAN
[Raw transfer]




MPD_B_7(1LE7)
PA2GX_HUMAN
[Raw transfer]




MPD_B_8(1LE7)
PA2GX_HUMAN
[Raw transfer]




MPD_B_7(1LE6)
PA2GX_HUMAN
[Raw transfer]




MRD_C_3(1JLT)
PA2AI_VIPAE
[Raw transfer]




MPD_D_4(1JLT)
PA2AI_VIPAE
[Raw transfer]




23 PsiBlast_CBE 97.55100%-112 - C6 -1LE6 3.8 PA2GX_HUMAN
21 PsiBlast_CBE 97.51100%-112 - C6 -1LE7 3.0 PA2GX_HUMAN
2 PsiBlast_PDB 95.46100%-109 - C6 -1LE7 3.0 PA2GX_HUMAN
34 HHSearch 95.03100%-106 - C6 -1LE6 Error PA2GX_HUMAN
46 HHSearch 74.1341%-106 - C6 -2QHD 4.5 PA2HS_ECHCA
40 HHSearch 68.3239%-107 - C6 -1JLT 3.3 PA2B_VIPAE
38 HHSearch 67.8933%-104 - C6 -1JLT 3.3 PA2AI_VIPAE
7 PsiBlast_PDB 66.9439% -98 - C6 -1KVO 5.2 PA2GA_HUMAN
11 PsiBlast_PDB 66.2739% -95 - C6 -1J1A 6.6 PA2GA_HUMAN
10 PsiBlast_PDB 66.0339% -88 - C6 -1DB5 6.4 PA2GA_HUMAN
9 PsiBlast_PDB 65.5239% -91 - C6 -1DB4 6.3 PA2GA_HUMAN
8 PsiBlast_PDB 65.3139% -91 - C6 -1DCY 5.2 PA2GA_HUMAN
5 PsiBlast_PDB 65.2439% -90 - C6 -1POE 5.9 PA2GA_HUMAN
15 PsiBlast_PDB 65.0939% -93 - C6 -3U8H 7.6 PA2GA_HUMAN
12 PsiBlast_PDB 64.7039% -93 - C6 -1KQU 6.6 PA2GA_HUMAN
6 PsiBlast_PDB 64.2139% -98 - C6 -1AYP 4.6 PA2GA_HUMAN