@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_AAPK1_: (2014-08-14 )
MRRLSSWRKMATAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETPRARHTLDELNPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTYSKMSLQLYQVDSRTYLLDFRSIDDEITEAKSGTATPQRSGSVSNYRSCQRSDSDAEAQGKSSEVSLTSSVTSLDSSPVDLTPRPGSHTIEFFEMCANLIKILAQ

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_4(2YEX)
CHK1_HUMAN
[Raw transfer]



STU_A_5(4CFH)
AAPK1_RAT
[Raw transfer]



ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]



ANP_A_2(4BL1)
MELK_HUMAN
[Raw transfer]



82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]



82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]



STU_B_2(1XJD)

[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



1WS_A_2(4BKZ)
MELK_HUMAN
[Raw transfer]



STU_A_7(1NXK)
MAPK2_HUMAN
[Raw transfer]



07U_A_2(3TXO)

[Raw transfer]



YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]



GOL_A_7(2YEX)
CHK1_HUMAN
[Raw transfer]



TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]



MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]



DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]



CHAIN_E_5(3IEC)
MARK2_HUMAN
[Raw transfer]
-
1 PsiBlast_PDB 91.8598%-121 - C1 -4CFH 8.3 AAPK1_RAT
6 PsiBlast_PDB 67.0290%-115 - C1 -3AQV 8.2 AAPK2_HUMAN
35 HHSearch 58.4142%-102 - C1 -4BKY 7.9 MELK_HUMAN
16 PsiBlast_PDB 56.0445%-109 - C1 -3IEC 8.2 MARK2_HUMAN
39 HHSearch 51.8038%-106 - C1 -4GV1 7.1 AKT1_HUMAN
48 HHSearch 49.9634% -92 - C1 -1RDQ 6.8 KAPCA_MOUSE
20 PsiBlast_PDB 49.9646% -91 - C1 -4BKZ 5.6 MELK_HUMAN
18 PsiBlast_PDB 48.8446% -93 - C1 -4BL1 6.5 MELK_HUMAN
43 HHSearch 46.0534% -91 - C1 -2Y0A 2.4 DAPK1_HUMAN
45 HHSearch 45.5834% -93 - C1 -1XJD 9.0
42 HHSearch 44.2134% -91 - C1 -2YEX 6.2 CHK1_HUMAN
47 HHSearch 43.9436% -96 - C1 -3TXO 6.1
55 HHSearch 43.6836% -81 - C1 -3SOA 3.4 KCC2A_HUMAN
53 HHSearch 40.8334% -91 - C1 -1NXK 8.3 MAPK2_HUMAN