@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_AURKB_: (2014-08-14 )
MAQKENAYPWPYGSKTSQSGLNTLSQRVLRKEPATTSALALVNRFNSQSTAAPGQKLAENKSQGSTASQGSQNKQPFTIDNFEIGRPLGKGKFGNVYLAREKKSRFIVALKILFKSQIEKEGVEHQLRREIEIQAHLKHPNILQLYNYFYDQQRIYLILEYAPRGELYKELQKSRTFDEQRTATIMEELSDALTYCHKKKVIHRDIKPENLLLGLQGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEMVDLWCIGVLCYELMVGNPPFESPSHSETYRRIVKVDLKFPSSVPSGAQDLISKLLKHNPWQRLPLAEVAAHPWVRANSRRVLPPSAL

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(4GV1)
AKT1_HUMAN
[Raw transfer]




AK3_A_2(3D2I)
AURKA_MOUSE
[Raw transfer]




ANP_A_5(4C2W)
?
[Raw transfer]




AK6_A_2(3DJ6)
AURKA_MOUSE
[Raw transfer]




VX6_A_5(4B8M)
AUKBA_XENLA
[Raw transfer]




YJA_A_5(4C2V)
?
[Raw transfer]




YJA_A_5(4C2V)
?
[Raw transfer]




VX6_A_3(4AF3)
AURKB_HUMAN
[Raw transfer]




AK7_A_2(3DJ7)
AURKA_MOUSE
[Raw transfer]




AK2_A_2(3D15)
AURKA_MOUSE
[Raw transfer]




H1N_A_5(2BFY)
AUKBA_XENLA
[Raw transfer]




447_B_6(2VRX)
AUKBA_XENLA
[Raw transfer]




ZTX_A_5(3ZTX)
AUKBA_XENLA
[Raw transfer]




VX6_B_6(4B8M)
AUKBA_XENLA
[Raw transfer]




A0P_A_3(4B8L)
AUKBA_XENLA
[Raw transfer]




H1N_B_6(2BFY)
AUKBA_XENLA
[Raw transfer]




ZZL_A_2(2WTW)
AURKA_HUMAN
[Raw transfer]




P9J_A_2(3W16)
?
[Raw transfer]




YJA_B_6(4C2V)
?
[Raw transfer]




XU1_A_2(4JAJ)
AURKA_HUMAN
[Raw transfer]




XU2_A_2(4JAI)
AURKA_HUMAN
[Raw transfer]




N13_B_4(3W18)
?
[Raw transfer]




N15_A_5(3W2C)
?
[Raw transfer]




ZTX_B_6(3ZTX)
AUKBA_XENLA
[Raw transfer]




AK5_A_2(3DJ5)
AURKA_MOUSE
[Raw transfer]




ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




N13_A_3(3W18)
?
[Raw transfer]




ADN_B_2(1MUO)
AURKA_HUMAN
[Raw transfer]




AD6_B_6(2VGP)
AUKBA_XENLA
[Raw transfer]




82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




447_A_5(2VRX)
AUKBA_XENLA
[Raw transfer]




AD5_A_5(2VGO)
AUKBA_XENLA
[Raw transfer]




07U_A_2(3TXO)

[Raw transfer]




AD6_A_5(2VGP)
AUKBA_XENLA
[Raw transfer]




AD5_B_6(2VGO)
AUKBA_XENLA
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




ANP_B_6(4C2W)
?
[Raw transfer]




6 PsiBlast_PDB 81.9077%-114 - C1 -2VGO 6.4 AUKBA_XENLA
45 HHSearch 81.4277%-112 - C1 -4C2V 8.6 ?
8 PsiBlast_PDB 80.6477%-114 - C1 -2VRX 7.9 AUKBA_XENLA
2 PsiBlast_PDB 79.7777%-116 - C1 -4B8M 6.9 AUKBA_XENLA
7 PsiBlast_PDB 79.7177%-112 - C1 -3ZTX 7.3 AUKBA_XENLA
10 PsiBlast_PDB 79.0377%-112 - C1 -4C2W 4.9 ?
11 PsiBlast_PDB 77.9776%-109 - C1 -2BFY 8.0 AUKBA_XENLA
5 PsiBlast_PDB 77.5877%-115 - C1 -2VGP 5.4 AUKBA_XENLA
1 PsiBlast_PDB 77.3191%-117 - C1 -4AF3 7.7 AURKB_HUMAN
15 PsiBlast_PDB 76.8471%-117 - C1 -3DJ7 9.1 AURKA_MOUSE
19 PsiBlast_PDB 75.0970%-110 - C1 -4JAJ 5.0 AURKA_HUMAN
9 PsiBlast_PDB 74.3977%-115 - C1 -4B8L 5.2 AUKBA_XENLA
12 PsiBlast_PDB 74.0372%-118 - C1 -2WTW 8.1 AURKA_HUMAN
17 PsiBlast_PDB 73.3171%-122 - C1 -3D2I 8.9 AURKA_MOUSE
31 PsiBlast_CBE 72.8071%-123 - C1 -3W16 5.3 ?
13 PsiBlast_PDB 72.5871%-125 - C1 -3DJ5 9.7 AURKA_MOUSE
14 PsiBlast_PDB 71.7771%-121 - C1 -3DJ6 10.6 AURKA_MOUSE
16 PsiBlast_PDB 71.6771%-116 - C1 -3D15 8.8 AURKA_MOUSE
18 PsiBlast_PDB 70.8770%-115 - C1 -4JAI 8.5 AURKA_HUMAN
20 PsiBlast_PDB 70.4270%-118 - C1 -1MUO 3.8 AURKA_HUMAN
29 PsiBlast_CBE 66.4671%-120 - C1 -3W18 9.0 ?
30 PsiBlast_CBE 64.4571%-124 - C1 -3W18 7.9 ?
25 PsiBlast_CBE 62.4077% -90 - C1 -2VGP 5.7 AUKBA_XENLA
48 HHSearch 62.3036%-112 * C1 *4GV1 6.9 AKT1_HUMAN
22 PsiBlast_CBE 61.5377% -88 - C1 -4C2V 7.8 ?
27 PsiBlast_CBE 61.3677% -89 - C1 -4C2W 4.1 ?
21 PsiBlast_CBE 60.8977% -90 - C1 -4B8M 7.4 AUKBA_XENLA
23 PsiBlast_CBE 59.5777% -87 - C1 -3ZTX 7.2 AUKBA_XENLA
28 PsiBlast_CBE 59.2576% -81 - C1 -2BFY 8.2 AUKBA_XENLA
24 PsiBlast_CBE 59.2377% -86 - C1 -2VRX 7.7 AUKBA_XENLA
52 HHSearch 59.1532%-105 - C1 -1RDQ 6.7 KAPCA_MOUSE
26 PsiBlast_CBE 58.3877% -87 - C1 -2VGO 6.2 AUKBA_XENLA
34 PsiBlast_CBE 56.5471%-132 - C1 -3W2C 8.5 ?
53 HHSearch 49.7831% -94 - C1 -1XJD 8.7
49 HHSearch 49.0234%-107 - C1 -3TXO 5.6
58 HHSearch 42.6230%-110 - C1 -4BKY 7.3 MELK_HUMAN