@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_CDK18_: (2014-08-15 )
MIMNKMKNFKRRFSLSVPRTETIEESLAEFTEQFNQLHNRRNENLQLGPLGRDPPQECSTFSPTDSGEEPGQLSPGVQFQRRQNQRRFSMEDVSKRLSLPMDIRLPQEFLQKLQMESPDLPKPLSRMSRRASLSDIGFGKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDLIHTDRSLTLVFEYLDSDLKQYLDHCGNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMATGRPLFPGSTVKEELHLIFRLLGTPTEETWPGVTAFSEFRTYSFPCYLPQPLINHAPRLDTDGIHLLSSLLLYESKSRMSAEAALSHSYFRSLGERVHQLEDTASIFSLKEIQLQKDPGYRGLAFQQPGRGKNRRQSIF

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EZV_A_2(3EZV)
CDK2_HUMAN
[Raw transfer]




EZR_A_2(3EZR)
CDK2_HUMAN
[Raw transfer]




ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




ANP_C_3(1J1B)
GSK3B_HUMAN
[Raw transfer]




N76_A_5(1OIU)
CDK2_HUMAN
[Raw transfer]




N20_A_5(1OI9)
CDK2_HUMAN
[Raw transfer]




ADP_A_4(3NIZ)
?
[Raw transfer]




ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]




N41_A_5(1OIY)
CDK2_HUMAN
[Raw transfer]




4SP_A_5(2IW8)
CDK2_HUMAN
[Raw transfer]




ATP_E_5(1UA2)
CDK7_HUMAN
[Raw transfer]




GOL_A_4(3N9X)
?
[Raw transfer]




MFR_A_7(3BHT)
CDK2_HUMAN
[Raw transfer]




ST8_A_5(1OGU)
CDK2_HUMAN
[Raw transfer]




RRC_A_5(1UNL)
CDK5_HUMAN
[Raw transfer]




ALH_A_5(1UNG)
CDK5_HUMAN
[Raw transfer]




MHR_A_7(3BHU)
CDK2_HUMAN
[Raw transfer]




1RO_A_5(4EOS)
CDK2_HUMAN
[Raw transfer]




VAR_A_7(3BHV)
CDK2_HUMAN
[Raw transfer]




Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]




Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]




JYM_A_5(4CFN)
CDK2_HUMAN
[Raw transfer]




0SR_A_3(4F6U)
CDK8_HUMAN
[Raw transfer]




RFZ_A_5(3MY5)
CDK2_HUMAN
[Raw transfer]




1CK_A_2(4EK4)
CDK2_HUMAN
[Raw transfer]




BOG_X_3(2FST)
MK14_HUMAN
[Raw transfer]




11 PsiBlast_PDB 86.0653%-101 - C1 -1OGU 6.0 CDK2_HUMAN
13 PsiBlast_PDB 85.1653%-104 - C1 -1OIU 6.1 CDK2_HUMAN
14 PsiBlast_PDB 84.9953%-101 - C1 -1OIY 6.0 CDK2_HUMAN
12 PsiBlast_PDB 84.8453%-104 - C1 -1OI9 6.3 CDK2_HUMAN
8 PsiBlast_PDB 84.6653%-103 - C1 -2IW8 6.8 CDK2_HUMAN
19 PsiBlast_PDB 84.5253%-102 - C1 -3BHV 6.2 CDK2_HUMAN
15 PsiBlast_PDB 84.4953%-103 - C1 -4CFN 4.9 CDK2_HUMAN
43 HHSearch 84.4357%-108 - C1 -4AU8 5.0 CDK5_HUMAN
16 PsiBlast_PDB 84.4153% -99 - C1 -4EOS 4.9 CDK2_HUMAN
5 PsiBlast_PDB 83.8856%-112 - C1 -1UNL 6.4 CDK5_HUMAN
17 PsiBlast_PDB 83.1053%-100 - C1 -3BHT 6.2 CDK2_HUMAN
10 PsiBlast_PDB 83.0853%-111 - C1 -3EZV 6.9 CDK2_HUMAN
20 PsiBlast_PDB 82.8753%-101 - C1 -3MY5 4.2 CDK2_HUMAN
18 PsiBlast_PDB 82.4453%-100 - C1 -3BHU 6.4 CDK2_HUMAN
3 PsiBlast_PDB 81.8656%-116 - C1 -1UNG 5.0 CDK5_HUMAN
9 PsiBlast_PDB 81.7953%-115 - C1 -3EZR 7.0 CDK2_HUMAN
47 HHSearch 81.4651%-108 - C1 -3NIZ 4.8 ?
36 HHSearch 75.5935%-100 - C1 -3N9X 2.7 ?
42 HHSearch 72.3637% -98 - C1 -4IC7 5.1 MK07_HUMAN
50 HHSearch 71.8534%-102 - C1 -2B9H 5.6 FUS3_YEAST
41 HHSearch 69.4731% -99 - C1 -1J1B 4.3 GSK3B_HUMAN
34 HHSearch 65.6840% -95 - C1 -1UA2 4.9 CDK7_HUMAN
51 HHSearch 64.6936%-106 - C1 -4BGQ 8.0 CDKL5_HUMAN
49 HHSearch 63.6835%-112 - C1 -2FST 3.3 MK14_HUMAN
52 HHSearch 63.2736%-114 - C1 -4F6U 9.1 CDK8_HUMAN
38 HHSearch 36.5654% 8 - C1 -4EK4 2.8 CDK2_HUMAN