@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_CDK1_M: (2014-08-15 )
MEDYIKIEKIGEGTYGVVYKGRHRVTGQIVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQDSRLYLIFEFLSMDLKKYLDSIPPGQFMDSSLVKSYLHQILQGIVFCHSRRVLHRDLKPQNLLIDDKGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNTFPKWKPGSLASHVKNLDENGLDLLSKMLVYDPAKRISGKMALKHPYFDDLDNQIKKM

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SU9_A_3(3PY1)
CDK2_HUMAN
[Raw transfer]




X01_A_3(3QL8)
CDK2_HUMAN
[Raw transfer]




X11_A_3(3QQJ)
CDK2_HUMAN
[Raw transfer]




ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]




X0A_A_6(3QQH)
CDK2_HUMAN
[Raw transfer]




JWS_A_4(3PXZ)
CDK2_HUMAN
[Raw transfer]




JWS_A_2(3PXY)
CDK2_HUMAN
[Raw transfer]




ADP_A_4(3NIZ)
?
[Raw transfer]




X14_A_4(3QRT)
CDK2_HUMAN
[Raw transfer]




ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




X03_A_2(3QQL)
CDK2_HUMAN
[Raw transfer]




SU9_A_4(3PY0)
CDK2_HUMAN
[Raw transfer]




X06_A_3(3QQG)
CDK2_HUMAN
[Raw transfer]




ATP_E_5(1UA2)
CDK7_HUMAN
[Raw transfer]




ANP_C_3(1J1B)
GSK3B_HUMAN
[Raw transfer]




2AN_A_3(3PXQ)
CDK2_HUMAN
[Raw transfer]




X07_A_3(3QQF)
CDK2_HUMAN
[Raw transfer]




GOL_A_3(3N9X)
?
[Raw transfer]




1CK_A_2(4EK4)
CDK2_HUMAN
[Raw transfer]




0SR_A_3(4F6U)
CDK8_HUMAN
[Raw transfer]




Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]




2AN_A_5(3PXQ)
CDK2_HUMAN
[Raw transfer]




2AN_A_5(3PY1)
CDK2_HUMAN
[Raw transfer]




EDO_A_2(3PY0)
CDK2_HUMAN
[Raw transfer]




2AN_A_2(3PXZ)
CDK2_HUMAN
[Raw transfer]




2AN_A_4(3PY1)
CDK2_HUMAN
[Raw transfer]




2AN_A_7(3PXF)
CDK2_HUMAN
[Raw transfer]




EDO_A_2(3PY1)
CDK2_HUMAN
[Raw transfer]




19 PsiBlast_PDB 98.2864%-111 - C1 -3QQL 4.7 CDK2_HUMAN
15 PsiBlast_PDB 97.7664%-111 - C1 -3QQF 4.7 CDK2_HUMAN
16 PsiBlast_PDB 96.4364%-104 - C1 -3QQG 5.6 CDK2_HUMAN
10 PsiBlast_PDB 96.3364%-106 - C1 -3PXY 5.4 CDK2_HUMAN
7 PsiBlast_PDB 96.2164%-107 - C1 -3PXF 4.1 CDK2_HUMAN
17 PsiBlast_PDB 96.0964%-107 - C1 -3QQH 7.2 CDK2_HUMAN
20 PsiBlast_PDB 96.0664%-111 - C1 -3QRT 6.3 CDK2_HUMAN
18 PsiBlast_PDB 95.8864%-103 - C1 -3QQJ 5.4 CDK2_HUMAN
11 PsiBlast_PDB 95.2164%-107 - C1 -3PXZ 5.5 CDK2_HUMAN
14 PsiBlast_PDB 95.1664%-106 - C1 -3QL8 5.1 CDK2_HUMAN
12 PsiBlast_PDB 95.0764%-104 - C1 -3PY0 5.6 CDK2_HUMAN
8 PsiBlast_PDB 94.9264%-100 - C1 -3PXQ 6.4 CDK2_HUMAN
13 PsiBlast_PDB 93.4064% -97 - C1 -3PY1 6.5 CDK2_HUMAN
45 HHSearch 89.5360%-110 - C1 -3NIZ 4.4 ?
37 HHSearch 85.9458%-105 - C1 -4AU8 4.9 CDK5_HUMAN
50 HHSearch 74.3540%-107 - C1 -4BGQ 7.9 CDKL5_HUMAN
52 HHSearch 73.8337%-102 - C1 -2B9H 5.5 FUS3_YEAST
33 HHSearch 71.4044% -97 - C1 -1UA2 4.9 CDK7_HUMAN
41 HHSearch 70.2136% -98 - C1 -4IC7 5.0 MK07_HUMAN
40 HHSearch 69.7938% -95 - C1 -3N9X 2.3 ?
49 HHSearch 68.5041%-103 - C1 -4F6U 9.0 CDK8_HUMAN
54 HHSearch 67.6132%-109 - C1 -1J1B 4.4 GSK3B_HUMAN
48 HHSearch 64.6636%-102 - C1 -2FST - MK14_HUMAN
32 HHSearch 49.0065% 18 - C1 -4EK4 2.0 CDK2_HUMAN