@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_CDK7_H: (2014-08-15 )
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEALEQGGLPKKLIF

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_H_8(1UA2)
CDK7_HUMAN
[Raw transfer]



ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]



ANP_C_3(1J1B)
GSK3B_HUMAN
[Raw transfer]



ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]



ATP_G_7(1UA2)
CDK7_HUMAN
[Raw transfer]



ATP_E_5(1UA2)
CDK7_HUMAN
[Raw transfer]



ADP_A_4(3NIZ)
?
[Raw transfer]



ATP_F_6(1UA2)
CDK7_HUMAN
[Raw transfer]



JWS_A_4(3PXZ)
CDK2_HUMAN
[Raw transfer]



GOL_A_4(3N9X)
?
[Raw transfer]



SU9_A_4(3PY0)
CDK2_HUMAN
[Raw transfer]



JWS_A_2(3PXY)
CDK2_HUMAN
[Raw transfer]



2AN_A_3(3PXQ)
CDK2_HUMAN
[Raw transfer]



0SR_A_3(4F6U)
CDK8_HUMAN
[Raw transfer]



Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]



2AN_A_5(3PXQ)
CDK2_HUMAN
[Raw transfer]



2AN_A_8(3PXF)
CDK2_HUMAN
[Raw transfer]



BOG_X_3(2FST)
MK14_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
34 HHSearch 90.52100%-124 - C1 -1UA2 5.1 CDK7_HUMAN
18 PsiBlast_PDB 76.1244%-111 - C1 -3PXY 5.3 CDK2_HUMAN
22 PsiBlast_CBE 75.9099% -90 - C1 -1UA2 5.7 CDK7_HUMAN
15 PsiBlast_PDB 73.6644%-110 - C1 -3PXF 6.4 CDK2_HUMAN
21 PsiBlast_CBE 73.4099% -87 - C1 -1UA2 5.2 CDK7_HUMAN
19 PsiBlast_PDB 73.1644%-109 - C1 -3PXZ 5.4 CDK2_HUMAN
16 PsiBlast_PDB 72.8144%-109 - C1 -3PXQ 6.5 CDK2_HUMAN
20 PsiBlast_PDB 72.6844%-106 - C1 -3PY0 5.6 CDK2_HUMAN
23 PsiBlast_CBE 71.2799% -83 - C1 -1UA2 4.5 CDK7_HUMAN
53 HHSearch 69.3436%-127 - C1 -2B9H 5.6 FUS3_YEAST
55 HHSearch 68.5446%-118 * C1 *3NIZ 4.8 ?
40 HHSearch 68.1546%-123 - C1 -4AU8 4.7 CDK5_HUMAN
35 HHSearch 67.9438%-117 - C1 -3N9X 2.6 ?
39 HHSearch 67.7236%-120 - C1 -4IC7 4.9 MK07_HUMAN
45 HHSearch 67.6641%-130 - C1 -4F6U 9.1 CDK8_HUMAN
52 HHSearch 62.8637%-129 - C1 -1J1B 4.6 GSK3B_HUMAN
49 HHSearch 60.7037%-127 - C1 -2FST 2.8 MK14_HUMAN