@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_CDKL1_: (2014-08-15 )
MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLAGPSDYYTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTQRLTCEQLLHHPYFENIREIEDLAKEHNKPTRKTLRKSRKHHCFTETSKLQYLPQLTGSSILPALDNKKYYCDTKKLNYRFPNI

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

D15_C_6(4AGU)
CDKL1_HUMAN
[Raw transfer]




EZV_A_2(3EZV)
CDK2_HUMAN
[Raw transfer]




D15_A_4(4AGU)
CDKL1_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




EZR_A_2(3EZR)
CDK2_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




404_A_2(3PJ8)
CDK2_HUMAN
[Raw transfer]




38R_A_2(3ZDU)
CDKL3_HUMAN
[Raw transfer]




D15_B_5(4AGU)
CDKL1_HUMAN
[Raw transfer]




ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]




4SP_A_5(2IW8)
CDK2_HUMAN
[Raw transfer]




SU9_A_3(3PY1)
CDK2_HUMAN
[Raw transfer]




HDT_A_2(1OIT)
CDK2_HUMAN
[Raw transfer]




ADP_A_4(3NIZ)
?
[Raw transfer]




ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]




SU9_A_4(3PY0)
CDK2_HUMAN
[Raw transfer]




DKI_A_2(4AAA)
CDKL2_HUMAN
[Raw transfer]




TC0_A_3(4BBM)
CDKL2_HUMAN
[Raw transfer]




DKI_A_2(4AAA)
CDKL2_HUMAN
[Raw transfer]




ANP_C_3(1J1B)
GSK3B_HUMAN
[Raw transfer]




GOL_A_4(3N9X)
?
[Raw transfer]




Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]




GOL_A_3(3N9X)
?
[Raw transfer]




X01_A_3(3QL8)
CDK2_HUMAN
[Raw transfer]




JWS_A_2(3PXY)
CDK2_HUMAN
[Raw transfer]




2AN_A_3(3PXQ)
CDK2_HUMAN
[Raw transfer]




JWS_A_4(3PXZ)
CDK2_HUMAN
[Raw transfer]




1CK_A_2(4EK4)
CDK2_HUMAN
[Raw transfer]




2AN_A_8(3PXF)
CDK2_HUMAN
[Raw transfer]




EDO_A_3(4AAA)
CDKL2_HUMAN
[Raw transfer]




2AN_A_5(3PY1)
CDK2_HUMAN
[Raw transfer]




EDO_A_2(3PY1)
CDK2_HUMAN
[Raw transfer]




21 PsiBlast_CBE 97.0298%-133 - C1 -4AGU 7.9 CDKL1_HUMAN
32 HHSearch 96.8698%-134 - C1 -4AGU 8.7 CDKL1_HUMAN
22 PsiBlast_CBE 95.3798%-135 - C1 -4AGU 7.3 CDKL1_HUMAN
33 HHSearch 80.1856%-129 - C1 -4AAA 7.1 CDKL2_HUMAN
3 PsiBlast_PDB 78.3457%-134 - C1 -4BBM 5.8 CDKL2_HUMAN
40 HHSearch 77.7334%-114 - C1 -3N9X 2.6 ?
4 PsiBlast_PDB 75.4048%-115 - C1 -3ZDU 7.9 CDKL3_HUMAN
34 HHSearch 71.0447%-127 - C1 -4BGQ 8.3 CDKL5_HUMAN
11 PsiBlast_PDB 69.8838%-122 - C1 -3NIZ 4.2 ?
12 PsiBlast_PDB 69.6138%-123 - C1 -3PJ8 5.9 CDK2_HUMAN
16 PsiBlast_PDB 69.4138%-119 - C1 -3PXY 4.8 CDK2_HUMAN
13 PsiBlast_PDB 68.6438%-113 - C1 -3PXF 6.5 CDK2_HUMAN
20 PsiBlast_PDB 68.0638%-116 - C1 -3QL8 5.2 CDK2_HUMAN
18 PsiBlast_PDB 67.6538%-116 - C1 -3PY0 5.4 CDK2_HUMAN
17 PsiBlast_PDB 66.9538%-109 - C1 -3PXZ 5.2 CDK2_HUMAN
19 PsiBlast_PDB 66.3238%-105 - C1 -3PY1 5.6 CDK2_HUMAN
51 HHSearch 65.9536%-117 - C1 -1J1B 4.3 GSK3B_HUMAN
9 PsiBlast_PDB 65.8339%-113 - C1 -2IW8 6.5 CDK2_HUMAN
14 PsiBlast_PDB 65.3038%-110 - C1 -3PXQ 5.3 CDK2_HUMAN
8 PsiBlast_PDB 65.2739%-119 - C1 -3EZV 7.3 CDK2_HUMAN
39 HHSearch 65.0934%-116 - C1 -4IC7 4.9 MK07_HUMAN
47 HHSearch 65.0034%-127 - C1 -2B9H 5.2 FUS3_YEAST
7 PsiBlast_PDB 64.1839%-119 - C1 -3EZR 6.7 CDK2_HUMAN
6 PsiBlast_PDB 63.4339%-120 - C1 -1OIT 5.1 CDK2_HUMAN
52 HHSearch 63.3740%-112 - C1 -4AU8 3.6 CDK5_HUMAN
48 HHSearch 54.7033%-118 - C1 -2FST - MK14_HUMAN
53 HHSearch 23.6541% -4 - C1 -4EK4 Error CDK2_HUMAN