@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_CDKL2_: (2014-08-15 )
MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQELQLKVQKDARNVSLSKKSQNRKKEKEKDDSLVEERKTLVVQDTNADPKIKDYKLFKIKGSKIDGEKAEKGNRASNASCLHDSRTSHNKIVPSTSLKDCSNVSVDHTRNPSVAIPPLTHNLSAVAPSINSGMGTETIPIQGYRVDEKTKKCSIPFVKPNRHSPSGIYNINVTTLVSGPPLSDDSGADLPQMEHQH

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

38R_A_2(3ZDU)
CDKL3_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




38R_A_2(3ZDU)
CDKL3_HUMAN
[Raw transfer]




EZV_A_2(3EZV)
CDK2_HUMAN
[Raw transfer]




EZR_A_2(3EZR)
CDK2_HUMAN
[Raw transfer]




404_A_2(3PJ8)
CDK2_HUMAN
[Raw transfer]




TC0_A_3(4BBM)
CDKL2_HUMAN
[Raw transfer]




TC0_B_7(4BBM)
CDKL2_HUMAN
[Raw transfer]




D15_A_4(4AGU)
CDKL1_HUMAN
[Raw transfer]




D15_A_4(4AGU)
CDKL1_HUMAN
[Raw transfer]




DKI_A_2(4AAA)
CDKL2_HUMAN
[Raw transfer]




4SP_A_5(4EOK)
CDK2_HUMAN
[Raw transfer]




ADP_A_4(3NIZ)
?
[Raw transfer]




ATP_A_5(4EOM)
CDK2_HUMAN
[Raw transfer]




1RO_A_5(4EON)
CDK2_HUMAN
[Raw transfer]




1RO_A_5(4EOL)
CDK2_HUMAN
[Raw transfer]




ANP_C_3(1J1B)
GSK3B_HUMAN
[Raw transfer]




1RO_A_5(4EOI)
CDK2_HUMAN
[Raw transfer]




GOL_A_3(3N9X)
?
[Raw transfer]




Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]




2AN_A_3(3PXQ)
CDK2_HUMAN
[Raw transfer]




JWS_A_4(3PXZ)
CDK2_HUMAN
[Raw transfer]




JWS_A_2(3PXY)
CDK2_HUMAN
[Raw transfer]




2AN_A_5(3PXQ)
CDK2_HUMAN
[Raw transfer]




EDO_A_3(4AAA)
CDKL2_HUMAN
[Raw transfer]




2AN_A_8(3PXF)
CDK2_HUMAN
[Raw transfer]




2AN_A_2(3PXZ)
CDK2_HUMAN
[Raw transfer]




1 PsiBlast_PDB 94.9399%-149 - C1 -4AAA 6.9 CDKL2_HUMAN
2 PsiBlast_PDB 94.7599%-140 - C1 -4BBM 5.6 CDKL2_HUMAN
21 PsiBlast_CBE 92.0199%-143 - C1 -4BBM 9.0 CDKL2_HUMAN
32 HHSearch 81.4857%-123 - C1 -3ZDU 8.4 CDKL3_HUMAN
34 HHSearch 76.6356%-132 - C1 -4AGU 8.3 CDKL1_HUMAN
35 HHSearch 70.6949%-141 - C1 -4BGQ 8.2 CDKL5_HUMAN
11 PsiBlast_PDB 68.8640%-122 - C1 -4EON 4.2 CDK2_HUMAN
19 PsiBlast_PDB 68.0140%-124 - C1 -3PXY 4.6 CDK2_HUMAN
14 PsiBlast_PDB 68.0040%-124 - C1 -4EOK 6.1 CDK2_HUMAN
12 PsiBlast_PDB 66.9840%-127 - C1 -4EOM 5.0 CDK2_HUMAN
16 PsiBlast_PDB 66.8540%-122 - C1 -3PXF 6.5 CDK2_HUMAN
13 PsiBlast_PDB 66.8140%-130 - C1 -3PJ8 5.9 CDK2_HUMAN
6 PsiBlast_PDB 66.3541%-121 - C1 -4EOI 5.6 CDK2_HUMAN
20 PsiBlast_PDB 66.2840%-119 - C1 -3PXZ 5.1 CDK2_HUMAN
9 PsiBlast_PDB 66.2840%-124 - C1 -3NIZ 4.6 ?
40 HHSearch 65.9134%-117 - C1 -3N9X 2.4 ?
15 PsiBlast_PDB 65.6040%-121 - C1 -4EOL 5.5 CDK2_HUMAN
17 PsiBlast_PDB 64.3340%-118 - C1 -3PXQ 5.6 CDK2_HUMAN
8 PsiBlast_PDB 62.1541%-132 - C1 -3EZV 6.5 CDK2_HUMAN
50 HHSearch 61.8440%-120 * C1 *4AU8 4.6 CDK5_HUMAN
46 HHSearch 59.5634%-127 - C1 -1J1B 4.2 GSK3B_HUMAN
7 PsiBlast_PDB 58.7841%-131 - C1 -3EZR 6.2 CDK2_HUMAN
52 HHSearch 53.6335%-131 - C1 -2FST - MK14_HUMAN