@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_CDPK4_: (2014-08-15 )
MGQEVSSVNNTKNEHHKTNKKSLKGGNERHEMKESSVGISKKIVENSFNNSKLRPGMFIQNSNVVFNEQYKGIKILGKGSFGEVILSRDKHTGHEYAIKVISKKHVKRKTDKESLLREVELLKMLDHINIMKLYEFFEDNNYYYLVSDVYTGGELFDEIISRKRFYEIDAARIIKQILSGITYMHKNNVVHRDLKPENILLETKNKEDMIIKIIDFGLSTHFEYSKKMKDKIGTAYYIAPDVLHGTYDEKCDIWSCGVILYILLSGCPPFNGSNEYDILKKVEAGKYTFDLPQFKKISDKAKDLIKKMLMYTSAVRISARDALEHEWIKMMTSKDNLNIDIPSLELSIANIRQFQSTQKLAQAALLYMGSKLTTIDETKELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGEDTSDLDNAAIEYEVDQILNSIDLDQNGYIEYSEFLTVSIDRKLLLSTERLEKAFKLFDKDGSGKISANELAQLFGLSDVSSECWKTVLKEVDQNNDGEIDFKEFRDMLVKLCNY

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UW9_A_2(3V5T)
?
[Raw transfer]




BK2_A_2(3I7C)
?
[Raw transfer]




BK1_A_2(3I7B)
?
[Raw transfer]




BK3_A_2(3N51)
?
[Raw transfer]




I76_A_2(3V51)
?
[Raw transfer]




21E_A_2(4M84)
?
[Raw transfer]




GOL_A_12(3HX4)
?
[Raw transfer]




BK6_A_2(3T3U)
?
[Raw transfer]




BK4_A_2(3T3V)
?
[Raw transfer]




BK5_A_2(3SXF)
?
[Raw transfer]




BK7_A_2(3SX9)
?
[Raw transfer]




ANP_A_5(3IGO)
?
[Raw transfer]




C88_A_2(3V5P)
?
[Raw transfer]




BK3_A_6(3MWU)
?
[Raw transfer]




B6A_A_2(3UPX)
?
[Raw transfer]




ANP_A_6(3HX4)
?
[Raw transfer]




ANP_A_2(3KU2)
?
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




1FB_A_2(4IHP)
?
[Raw transfer]




82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




ANP_A_8(3Q5I)
?
[Raw transfer]




B5A_A_2(3UPZ)
?
[Raw transfer]




ANP_A_7(3LIJ)
?
[Raw transfer]




DRK_A_2(3F3Z)
?
[Raw transfer]




DTQ_A_2(3NYV)
?
[Raw transfer]




DTQ_A_2(3NYV)
?
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_A_3(3I7B)
?
[Raw transfer]




EDO_A_4(3T3U)
?
[Raw transfer]




34 HHSearch 95.1673%-104 - C1 -3NYV 6.5 ?
7 PsiBlast_PDB 94.9274%-102 - C1 -3N51 8.5 ?
18 PsiBlast_PDB 94.7472% -99 - C1 -3I7C 7.7 ?
6 PsiBlast_PDB 94.5374% -96 - C1 -3I7B 8.0 ?
17 PsiBlast_PDB 94.4374%-100 - C1 -4M84 5.8 ?
16 PsiBlast_PDB 94.1774% -98 - C1 -3V5T 7.8 ?
8 PsiBlast_PDB 94.0974%-101 - C1 -3SX9 8.1 ?
10 PsiBlast_PDB 93.9774%-103 - C1 -3T3U 7.2 ?
11 PsiBlast_PDB 93.7374%-100 - C1 -3T3V 7.6 ?
12 PsiBlast_PDB 93.6974%-102 - C1 -3UPX 7.2 ?
9 PsiBlast_PDB 93.4974%-101 - C1 -3SXF 7.6 ?
15 PsiBlast_PDB 93.0974% -98 - C1 -3V5P 6.9 ?
1 PsiBlast_PDB 92.8774%-102 - C1 -3KU2 4.8 ?
13 PsiBlast_PDB 92.3774% -97 - C1 -3UPZ 4.8 ?
14 PsiBlast_PDB 91.1474% -96 - C1 -3V51 10.1 ?
2 PsiBlast_PDB 90.1374% -99 - C1 -4IHP 7.2 ?
3 PsiBlast_PDB 89.2874% -97 - C1 -3HX4 4.3 ?
36 HHSearch 78.3753% -88 - C1 -3Q5I 4.7 ?
33 HHSearch 78.2860% -99 - C1 -3LIJ 4.0 ?
35 HHSearch 73.2960% -82 - C1 -3MWU 7.8 ?
20 PsiBlast_PDB 71.4260% -80 - C1 -3IGO 6.0 ?
22 PsiBlast_CBE 46.2477%-106 - C1 -3MA6 5.1 ?
21 PsiBlast_CBE 43.6477%-108 - C1 -3MA6 7.0 ?
37 HHSearch 38.3531% -61 - C1 -3SOA 4.0 KCC2A_HUMAN
47 HHSearch 35.1143%-100 - C1 -3F3Z 5.8 ?
42 HHSearch 32.2737% -92 - C1 -2Y0A 2.6 DAPK1_HUMAN
52 HHSearch 29.8735% -92 - C1 -2W4O 3.4 KCC4_HUMAN
48 HHSearch 28.8232% -96 - C1 -4BKY 7.5 MELK_HUMAN