@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_CLK3_M: (2014-08-15 )
MPVLSARRKRLASTAGPRRGSGPSLAVRWVPPLGPEPSSDRGRAPMRPRGPTCSTTRRGAGRGPRLLPGPPGRDLHRCRPDPGGAGQSPRVCEFGARAVRPLGRVEPGPPTAASREGAVLPRAEARAGSGRGARSGEWGLAAAGAWETMHHCKRYRSPEPDPYLSYRWKRRRSYSREHEGRLRYPSRREPPPRRSRSRSHDRIPYQRRYREHRDSDTYRCEERSPSFGEDCYGSSRSRHRRRSRERAPYRTRKHAHHCHKRRTRSCSSASSRSQQSSKRSSRSVEDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHSSRNPSR

Atome Classification :

(9 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(3LLT)
?
[Raw transfer]




ANP_A_4(3LLT)
?
[Raw transfer]




3RA_B_4(3RAW)
CLK3_HUMAN
[Raw transfer]




3RA_A_3(3RAW)
CLK3_HUMAN
[Raw transfer]




NR9_A_4(3NR9)
CLK2_HUMAN
[Raw transfer]




DBQ_A_2(1Z57)
CLK1_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




ANP_A_7(1Q99)
SKY1_YEAST
[Raw transfer]




V25_A_2(2WU7)
CLK3_HUMAN
[Raw transfer]




DKI_A_2(2WU6)
CLK3_HUMAN
[Raw transfer]




V25_A_2(2VAG)
CLK1_HUMAN
[Raw transfer]




EDO_I_9(1HOW)
SKY1_YEAST
[Raw transfer]




EDO_A_11(2X7G)
SRPK2_HUMAN
[Raw transfer]




DMS_A_5(3QYZ)
MK01_RAT
[Raw transfer]




DMS_A_4(3QYZ)
MK01_RAT
[Raw transfer]




1 PsiBlast_PDB 97.0299%-122 - C1 -2WU6 6.8 CLK3_HUMAN
3 PsiBlast_PDB 96.3499%-118 - C1 -3RAW 6.9 CLK3_HUMAN
2 PsiBlast_PDB 95.1199%-120 - C1 -2WU7 6.6 CLK3_HUMAN
21 PsiBlast_CBE 94.0999%-115 - C1 -3RAW 6.9 CLK3_HUMAN
6 PsiBlast_PDB 87.5470%-122 - C1 -3NR9 7.2 CLK2_HUMAN
7 PsiBlast_PDB 80.6061%-116 - C1 -1Z57 5.3 CLK1_HUMAN
8 PsiBlast_PDB 80.0760%-117 - C1 -2VAG 6.5 CLK1_HUMAN
34 HHSearch 70.9538%-113 - C1 -3LLT 5.3 ?
40 HHSearch 56.3832%-112 - C1 -4BGQ 7.9 CDKL5_HUMAN