@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_DCLK1_: (2014-08-16 )
MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTRTLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQGVRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAVSSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITDAIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKSTSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGSLRKQRSSQHGGSSTSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDGNFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVPTELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQRFSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIALDHGFTIKRSGSLDYYQQPGMYWIRPPLLIRRGRFSDEDATRM

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




ANP_A_7(3LIJ)
?
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




BK3_A_6(3MWU)
?
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




10 PsiBlast_PDB 86.1043%-118 - C1 -2V7O 4.6 KCC2G_HUMAN
11 PsiBlast_PDB 85.5443%-125 - C1 -3BHH 5.8 KCC2B_HUMAN
37 HHSearch 84.2242%-117 - C1 -3SOA 3.4 KCC2A_HUMAN
6 PsiBlast_PDB 83.7446%-107 - C1 -4FG8 5.4 KCC1A_HUMAN
13 PsiBlast_PDB 83.6742%-120 - C1 -2WEL 5.1 KCC2D_HUMAN
4 PsiBlast_PDB 83.5246%-106 - C1 -4FG9 5.6 KCC1A_HUMAN
36 HHSearch 82.8838%-111 - C1 -2Y0A 2.6 DAPK1_HUMAN
7 PsiBlast_PDB 82.5546%-122 - C1 -4FG7 4.4 KCC1A_HUMAN
50 HHSearch 82.3242%-102 - C1 -2JAM 2.0 KCC1G_HUMAN
15 PsiBlast_PDB 81.9342%-121 - C1 -2VN9 5.5 KCC2D_HUMAN
41 HHSearch 81.7737%-111 - C1 -3HKO 4.7 ?
43 HHSearch 79.8939%-121 - C1 -3LIJ 3.6 ?
38 HHSearch 76.2436%-114 * C1 *3C0I 4.8 CSKP_HUMAN
52 HHSearch 74.2343%-117 - C1 -2W4O 4.6 KCC4_HUMAN
48 HHSearch 73.6140%-103 - C1 -3MWU 7.2 ?
44 HHSearch 72.4936%-110 - C1 -4BKY 7.4 MELK_HUMAN