@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_DCLK2_: (2014-08-16 )
MASTRSIELEHFEERDKRPRPGSRRGAPSSSGGSSSSGPKGNGLIPSPAHSAHCSFYRTRTLQALSSEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLIELTRSLSDNVNLPQGVRTIYTIDGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNINPNWSVNIKGGTSRALAAASSVKSEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAHSFEQVLTDITEAIKLDSGVVKRLCTLDGKQVTCLQDFFGDDDVFIACGPEKFRYAQDDFVLDHSECRVLKSSYSRSSAVKYSGSKSPGPSRRSKSPASVNGTPSSQLSTPKSTKSSSSSPTSPGSFRGLKQISAHGRSSSNVNGGPELDRCISPEGVNGNRCSESSTLLEKYKIGKVIGDGNFAVVKECIDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLVEEMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHGLSIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQVNVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPKQNSTTTGVSVIMNTALDKEGQIFCSKHCQDSGRPGMEPISPVPPSVEEIPVPGEAVPAPTPPESPTPHPPPAAPGGERAGTWRRHRD

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_4(2YEX)
CHK1_HUMAN
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ANP_A_5(3IGO)
?
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




ANP_A_7(3LIJ)
?
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




BK3_A_6(3MWU)
?
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




40 HHSearch 91.1338%-108 - C1 -3HKO 5.1 ?
13 PsiBlast_PDB 88.2139%-118 - C1 -2WEL 5.1 KCC2D_HUMAN
10 PsiBlast_PDB 87.8940%-106 - C1 -3BHH 5.9 KCC2B_HUMAN
9 PsiBlast_PDB 85.2837% -94 - C1 -2V7O 4.8 KCC2G_HUMAN
41 HHSearch 85.1944%-117 - C1 -4FG7 4.4 KCC1A_HUMAN
14 PsiBlast_PDB 83.7939%-103 - C1 -2VN9 5.0 KCC2D_HUMAN
45 HHSearch 83.3840%-100 - C1 -2JAM 2.0 KCC1G_HUMAN
12 PsiBlast_PDB 83.3537% -90 - C1 -3SOA 3.8 KCC2A_HUMAN
3 PsiBlast_PDB 82.1842%-108 - C1 -4FG8 5.5 KCC1A_HUMAN
38 HHSearch 81.7637%-109 - C1 -2Y0A 2.3 DAPK1_HUMAN
51 HHSearch 80.9643%-112 - C1 -2W4O 4.7 KCC4_HUMAN
4 PsiBlast_PDB 80.2942% -97 - C1 -4FG9 5.7 KCC1A_HUMAN
43 HHSearch 79.2138%-114 * C1 *3LIJ 3.7 ?
37 HHSearch 79.0737%-115 - C1 -3C0I 5.0 CSKP_HUMAN
48 HHSearch 77.8240%-108 - C1 -3MWU 7.3 ?
20 PsiBlast_PDB 77.7739%-106 - C1 -3IGO 5.6 ?
44 HHSearch 75.7138%-110 - C1 -4BKY 7.4 MELK_HUMAN
19 PsiBlast_PDB 75.4439%-104 - C1 -2WEI 5.6 ?
52 HHSearch 63.6830% -93 - C1 -2YEX Error CHK1_HUMAN