@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_DMPK_H: (2014-08-16 )
MSAEVRLRRLQQLVLDPGFLGLEPLLDLLLGVHQELGASELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIREGAPLGVHLPFVGYSYSCMALRDSEVPGPTPMELEAEQLLEPHVQAPSLEPSVSPQDETAEVAVPAAVPAAEAEAEVTLRELQEALEEEVLTRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQAEGATAVTGVPSPRATDPPSHLDGPPAVAVGQCPLVGPGPMHRRHLLLPARVPRPGLSEALSLLLFAVVLSRAAALGCIGLVAHAGQLTAVWRRPGAARAP

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]



ADP_A_6(3C4Z)
RK_BOVIN
[Raw transfer]



M77_E_5(2F2U)
ROCK2_BOVIN
[Raw transfer]



ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



M77_D_4(2ESM)
ROCK1_HUMAN
[Raw transfer]



ANP_A_5(2V55)
ROCK1_HUMAN
[Raw transfer]



M77_C_3(2GNI)
KAPCA_BOVIN
[Raw transfer]



H52_C_3(2GNH)
KAPCA_BOVIN
[Raw transfer]



HFS_C_3(2ETK)
ROCK1_HUMAN
[Raw transfer]



M77_A_3(3TKU)
MRCKB_HUMAN
[Raw transfer]



H52_A_3(3D9V)
ROCK1_HUMAN
[Raw transfer]



82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]



07U_A_2(3TXO)

[Raw transfer]



Y27_C_3(2ETR)
ROCK1_HUMAN
[Raw transfer]



Y27_C_3(2H9V)
ROCK2_BOVIN
[Raw transfer]



NM7_A_3(3QFV)
MRCKB_HUMAN
[Raw transfer]



1WU_A_3(4L6Q)
ROCK2_HUMAN
[Raw transfer]



ADE_A_3(4DC2)
KPCI_MOUSE
[Raw transfer]



EDO_A_5(4AW2)
MRCKA_RAT
[Raw transfer]



SL0_A_2(3UBD)
KS6A3_MOUSE
[Raw transfer]



CHAIN_I_2(2GNH)
KAPCA_BOVIN
[Raw transfer]
-
3 PsiBlast_PDB 87.5259%-119 - C1 -3QFV 3.9 MRCKB_HUMAN
32 HHSearch 86.9561%-120 - C1 -4AW2 - MRCKA_RAT
4 PsiBlast_PDB 84.8659%-113 - C1 -3TKU 4.8 MRCKB_HUMAN
16 PsiBlast_PDB 80.4643%-120 - C1 -2F2U 4.7 ROCK2_BOVIN
7 PsiBlast_PDB 80.0544%-116 - C1 -2ETR 4.5 ROCK1_HUMAN
8 PsiBlast_PDB 79.5544%-118 - C1 -3D9V 5.5 ROCK1_HUMAN
5 PsiBlast_PDB 79.3244%-115 - C1 -2ESM 4.8 ROCK1_HUMAN
15 PsiBlast_PDB 79.0343%-120 - C1 -4L6Q 5.2 ROCK2_HUMAN
6 PsiBlast_PDB 78.7444%-118 - C1 -2ETK 4.2 ROCK1_HUMAN
17 PsiBlast_PDB 78.0443%-109 - C1 -2H9V 5.1 ROCK2_BOVIN
14 PsiBlast_PDB 77.5544%-113 - C1 -2V55 4.0 ROCK1_HUMAN
35 HHSearch 66.9338%-114 - C1 -4GV1 6.3 AKT1_HUMAN
19 PsiBlast_PDB 63.6836%-104 - C1 -2GNH 5.5 KAPCA_BOVIN
38 HHSearch 63.4237%-113 * C1 *1RDQ 7.3 KAPCA_MOUSE
20 PsiBlast_PDB 61.9936%-101 - C1 -2GNI 5.2 KAPCA_BOVIN
37 HHSearch 59.4440%-106 - C1 -3TXO 6.6
40 HHSearch 57.6138%-103 - C1 -4DC2 3.1 KPCI_MOUSE
55 HHSearch 54.0539%-113 - C1 -3UBD 6.0 KS6A3_MOUSE