@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_E2AK2_: (2014-08-16 )
MAGDLSAGFFMEELNTYRQKQGVVLKYQELPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVEILNKEKKAVSPLLLTTTNSSEGLSMGNYIGLINRIAQKKRLTVNYEQCASGVHGPEGFHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYLQILSEETSVKSDYLSSGSFATTCESQSNSLVTSTLASESSSEGDFSADTSEINSNSDSLNSSSLLMNGLRNNQRKAKRSLAPRFDLPDMKETKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHTC

Atome Classification :

(13 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]



ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]



SAP_A_2(2W5B)
NEK2_HUMAN
[Raw transfer]



VGK_A_2(2WQO)
NEK2_HUMAN
[Raw transfer]



XK3_A_2(2XK3)
NEK2_HUMAN
[Raw transfer]



OL2_A_2(2XK4)
NEK2_HUMAN
[Raw transfer]



ATP_A_7(1ZYD)
GCN2_YEAST
[Raw transfer]



EQH_A_2(2XK6)
NEK2_HUMAN
[Raw transfer]



ANP_A_5(1ZY5)
GCN2_YEAST
[Raw transfer]



ANP_C_10(2A19)
E2AK2_HUMAN
[Raw transfer]



ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]



ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]



GOL_C_3(1ZY4)
GCN2_YEAST
[Raw transfer]



GOL_C_3(1ZY4)
GCN2_YEAST
[Raw transfer]



5Z5_A_2(2JAV)
NEK2_HUMAN
[Raw transfer]



0WH_A_3(4G31)

[Raw transfer]



0WH_A_3(4G31)

[Raw transfer]



EDO_A_3(3P1A)
PMYT1_HUMAN
[Raw transfer]



EDO_A_11(3P1A)
PMYT1_HUMAN
[Raw transfer]
32 HHSearch 86.6099% -91 - C2 -2A19 4.6 E2AK2_HUMAN
21 PsiBlast_CBE 75.9394% -99 - C2 -2A19 4.1 E2AK2_HUMAN
34 HHSearch 69.7542% -89 - C2 -4G31 10.4
36 HHSearch 69.3632% -93 - C2 -2W5A 4.9 NEK2_HUMAN
35 HHSearch 66.2134% -75 - C2 -1ZY4 2.0 GCN2_YEAST
14 PsiBlast_PDB 65.2731% -72 - C2 -2W5B 5.0 NEK2_HUMAN
8 PsiBlast_PDB 64.4333% -87 - C2 -1ZY5 4.5 GCN2_YEAST
10 PsiBlast_PDB 64.2632% -85 - C2 -1ZYD 5.3 GCN2_YEAST
13 PsiBlast_PDB 63.6531% -88 - C2 -2JAV 6.7 NEK2_HUMAN
20 PsiBlast_PDB 61.9931% -84 - C2 -2XK6 6.5 NEK2_HUMAN
18 PsiBlast_PDB 61.7131% -79 - C2 -2XK3 6.4 NEK2_HUMAN
19 PsiBlast_PDB 61.6231% -80 - C2 -2XK4 7.2 NEK2_HUMAN
17 PsiBlast_PDB 61.3931% -82 - C2 -2WQO 8.2 NEK2_HUMAN