@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_IRAK4_: (2014-08-16 )
MNKPITPSTYVRCLNVGLIRKLSDFIDPQEGWKKLAVAIKKPSGDDRYNQFHIRRFEALLQTGKSPTSELLFDWGTTNCTVGDLVDLLIQNEFFAPASLLLPDAVPKTANTLPSKEAITVQQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS

Atome Classification :

(13 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(4OA9)
?
[Raw transfer]



ANP_A_2(3UIM)
BAK1_ARATH
[Raw transfer]



ADP_A_2(4OAC)
?
[Raw transfer]



ADP_A_2(4OAC)
?
[Raw transfer]



ANP_A_2(3UIM)
BAK1_ARATH
[Raw transfer]



ADP_A_2(4OA2)
?
[Raw transfer]



T12_C_9(2NRU)
IRAK4_HUMAN
[Raw transfer]



ADP_A_2(4OA2)
?
[Raw transfer]



ATP_A_2(4OAB)
?
[Raw transfer]



T12_A_7(2NRU)
IRAK4_HUMAN
[Raw transfer]



T12_A_7(2NRU)
IRAK4_HUMAN
[Raw transfer]



T12_D_10(2NRU)
IRAK4_HUMAN
[Raw transfer]



STU_E_5(2OIC)
IRAK4_HUMAN
[Raw transfer]



T12_B_8(2NRU)
IRAK4_HUMAN
[Raw transfer]



046_A_2(3UGC)

[Raw transfer]



STI_A_3(4BKJ)
DDR1_HUMAN
[Raw transfer]



STU_A_8(2NRY)
IRAK4_HUMAN
[Raw transfer]



ADN_A_2(2EVA)
M3K7_HUMAN
[Raw transfer]



STI_A_4(1T46)

[Raw transfer]



03P_A_5(3POZ)

[Raw transfer]



GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]



0VF_A_2(4FYO)

[Raw transfer]



STU_B_2(1BYG)
CSK_HUMAN
[Raw transfer]



BAX_A_3(1UWH)
BRAF_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
34 HHSearch 92.83100%-100 - C2 -2NRU 8.2 IRAK4_HUMAN
4 PsiBlast_PDB 92.6499% -99 - C2 -2OIC 8.4 IRAK4_HUMAN
1 PsiBlast_PDB 91.8899% -95 - C2 -2NRY 9.4 IRAK4_HUMAN
23 PsiBlast_CBE 73.3299% -41 - C2 -2NRU 8.1 IRAK4_HUMAN
21 PsiBlast_CBE 73.1099% -39 - C2 -2NRU 7.2 IRAK4_HUMAN
22 PsiBlast_CBE 72.9299% -39 - C2 -2NRU 8.7 IRAK4_HUMAN
36 HHSearch 68.3838% -85 - C2 -3UIM 4.5 BAK1_ARATH
35 HHSearch 67.5536% -77 - C2 -4OAC 3.9 ?
37 HHSearch 66.3136% -72 - C2 -4OA2 3.7 ?
16 PsiBlast_PDB 61.1234% -69 - C2 -4OAB 4.3 ?
13 PsiBlast_PDB 59.9834% -65 - C2 -4OA9 5.1 ?
25 Fugue 56.6031% -91 - C2 -1BYG 7.4 CSK_HUMAN
19 PsiBlast_PDB 53.1431% -69 - C2 -1UWH 7.8 BRAF_HUMAN