@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_KCC1A_: (2014-08-17 )
MLGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKLQLGTSQEGQGQTASHGELLTPVAGGPAAGCCCRDCCVEPGTELSPTLPHQL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]



ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]



ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]



ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]



ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]



ANP_A_8(3Q5I)
?
[Raw transfer]



QPP_C_4(2JC6)
KCC1D_HUMAN
[Raw transfer]



GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]



QPP_A_3(2JC6)
KCC1D_HUMAN
[Raw transfer]



5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]



K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]



ANP_A_7(3LIJ)
?
[Raw transfer]



82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]



ANP_A_7(3LIJ)
?
[Raw transfer]



GOL_A_9(3HZT)
?
[Raw transfer]



J60_A_7(3HZT)
?
[Raw transfer]



GOL_A_4(3HZT)
?
[Raw transfer]



DTQ_A_2(3NYV)
?
[Raw transfer]



BK3_A_6(3MWU)
?
[Raw transfer]



J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]



DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]



DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]



J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]



MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]



DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]



HCW_A_2(2YCR)
CHK2_HUMAN
[Raw transfer]



YCF_A_2(2YCF)
CHK2_HUMAN
[Raw transfer]



EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]



EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]



DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]



EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]
6 PsiBlast_PDB 84.7484%-136 - C1 -2JC6 6.9 KCC1D_HUMAN
23 PsiBlast_CBE 84.1684%-137 - C1 -2JC6 6.8 KCC1D_HUMAN
2 PsiBlast_PDB 83.50100%-129 - C1 -4FG9 5.8 KCC1A_HUMAN
4 PsiBlast_PDB 80.55100%-145 - C1 -4FG8 6.3 KCC1A_HUMAN
21 PsiBlast_CBE 80.43100%-133 - C1 -4FG9 6.1 KCC1A_HUMAN
22 PsiBlast_CBE 75.79100%-140 - C1 -4FG8 4.6 KCC1A_HUMAN
36 HHSearch 75.71100%-147 - C1 -4FG7 4.6 KCC1A_HUMAN
35 HHSearch 69.6971%-125 - C1 -2JAM 6.5 KCC1G_HUMAN
18 PsiBlast_PDB 62.1441%-112 - C1 -3BHH 4.5 KCC2B_HUMAN
44 HHSearch 61.4240%-115 - C1 -3MWU 7.3 ?
14 PsiBlast_PDB 61.3441%-122 - C1 -2WEL 5.8 KCC2D_HUMAN
11 PsiBlast_PDB 59.5541%-109 - C1 -2V7O 6.4 KCC2G_HUMAN
16 PsiBlast_PDB 58.3041%-106 - C1 -2VN9 6.9 KCC2D_HUMAN
42 HHSearch 52.8241%-122 - C1 -2Y0A 2.2 DAPK1_HUMAN
45 HHSearch 52.2240%-107 - C1 -3NYV 5.8 ?
43 HHSearch 51.7040%-118 - C1 -3LIJ 4.0 ?
40 HHSearch 51.4842% -98 - C1 -3SOA 3.6 KCC2A_HUMAN
17 PsiBlast_PDB 46.1043%-126 - C1 -3HZT 6.3 ?
48 HHSearch 45.6747%-123 - C1 -2W4O 5.3 KCC4_HUMAN
49 HHSearch 44.3738%-116 - C1 -3Q5I 4.1 ?
19 PsiBlast_PDB 40.2741%-118 - C1 -2YCR 6.8 CHK2_HUMAN
20 PsiBlast_PDB 37.0741%-112 - C1 -2YCF 7.7 CHK2_HUMAN
52 HHSearch 34.8435%-128 - C1 -4BKY 7.6 MELK_HUMAN