@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_KCC1D_: (2014-08-17 )
MARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLHLGSSLDSSNASVSSSLSLASQKDCAYVAKPESLS

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]



ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]



ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]



ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]



ANP_A_5(3IGO)
?
[Raw transfer]



ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]



ANP_A_8(3Q5I)
?
[Raw transfer]



GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]



ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]



82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]



K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]



5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]



ANP_A_7(3LIJ)
?
[Raw transfer]



BK3_A_6(3MWU)
?
[Raw transfer]



ANP_A_7(3LIJ)
?
[Raw transfer]



GOL_A_9(3HZT)
?
[Raw transfer]



GOL_A_4(3HZT)
?
[Raw transfer]



DTQ_A_2(3NYV)
?
[Raw transfer]



J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]



DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]



J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]



J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]



J60_A_7(3HZT)
?
[Raw transfer]



MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]



DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]



EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]



EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]



EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]



DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]



DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]



EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]
2 PsiBlast_PDB 83.5984%-123 - C1 -4FG9 5.8 KCC1A_HUMAN
4 PsiBlast_PDB 83.2984%-137 - C1 -4FG8 6.3 KCC1A_HUMAN
21 PsiBlast_CBE 80.7884%-126 - C1 -4FG9 6.1 KCC1A_HUMAN
22 PsiBlast_CBE 80.2184%-134 - C1 -4FG8 4.6 KCC1A_HUMAN
36 HHSearch 80.0882%-139 - C1 -4FG7 4.6 KCC1A_HUMAN
35 HHSearch 78.0074%-121 - C1 -2JAM 6.6 KCC1G_HUMAN
23 PsiBlast_CBE 77.0374%-118 - C1 -2JAM 6.4 KCC1G_HUMAN
15 PsiBlast_PDB 62.2441% -99 - C1 -2V7O 6.4 KCC2G_HUMAN
12 PsiBlast_PDB 61.6741% -97 - C1 -2VN9 6.9 KCC2D_HUMAN
11 PsiBlast_PDB 60.5741%-114 - C1 -2WEL 5.8 KCC2D_HUMAN
14 PsiBlast_PDB 60.2041%-102 - C1 -3BHH 4.5 KCC2B_HUMAN
45 HHSearch 58.6840%-107 - C1 -3MWU 7.3 ?
42 HHSearch 58.5040%-114 - C1 -2Y0A 2.2 DAPK1_HUMAN
40 HHSearch 58.3741% -95 - C1 -3SOA 3.4 KCC2A_HUMAN
19 PsiBlast_PDB 56.6335%-107 - C1 -2YAA 5.1 DAPK2_MOUSE
49 HHSearch 56.4338%-113 - C1 -3Q5I 4.1 ?
44 HHSearch 56.0938%-102 - C1 -3NYV 5.8 ?
43 HHSearch 55.0839%-111 - C1 -3LIJ 4.0 ?
7 PsiBlast_PDB 50.5946%-109 - C1 -2W4O 5.3 KCC4_HUMAN
20 PsiBlast_PDB 49.4541%-110 - C1 -3IGO 5.3 ?
17 PsiBlast_PDB 46.4243%-121 - C1 -3HZT 6.3 ?
52 HHSearch 44.1937%-122 - C1 -4BKY 7.5 MELK_HUMAN