@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_KCC1G_: (2014-08-17 )
MGRKEEDDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQKNFAKSKWRQAFNAAAVVHHMRKLHMNLHSPGVRPEVENRPPETQASETSRPSSPEITITEAPVLDHSVALPALTQLPCQHGRRPTAPGGRSLNCLVNGSLHISSSLVPMHQGSLAAGPCGCCSSCLNIGSKGKSSYCSEPTLLKKANKKQNFKSEVMVPVKASGSSHCRAGQTGVCLIM

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




ANP_A_8(3Q5I)
?
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




ANP_A_7(3LIJ)
?
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




DTQ_A_2(3NYV)
?
[Raw transfer]




GOL_A_9(3HZT)
?
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




GOL_A_4(3HZT)
?
[Raw transfer]




YIR_A_2(2YIR)
CHK2_HUMAN
[Raw transfer]




BK3_A_6(3MWU)
?
[Raw transfer]




J60_A_7(3HZT)
?
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




YIQ_A_2(2YIQ)
CHK2_HUMAN
[Raw transfer]




ZAT_A_2(2W0J)
CHK2_HUMAN
[Raw transfer]




YCF_A_2(2YCF)
CHK2_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




21 PsiBlast_CBE 83.38100%-123 - C1 -2JAM 6.4 KCC1G_HUMAN
32 HHSearch 82.55100%-121 - C1 -2JAM 6.6 KCC1G_HUMAN
3 PsiBlast_PDB 75.6370%-119 - C1 -4FG9 5.4 KCC1A_HUMAN
5 PsiBlast_PDB 74.8870%-129 - C1 -4FG8 5.4 KCC1A_HUMAN
35 HHSearch 73.0769%-132 - C1 -4FG7 4.7 KCC1A_HUMAN
40 HHSearch 62.7141%-113 - C1 -2Y0A 2.4 DAPK1_HUMAN
15 PsiBlast_PDB 62.1043%-119 - C1 -2V7O 6.4 KCC2G_HUMAN
41 HHSearch 61.4042%-111 - C1 -3LIJ 3.9 ?
44 HHSearch 61.3440%-102 - C1 -3NYV 5.8 ?
49 HHSearch 60.3938%-107 - C1 -3Q5I 4.1 ?
12 PsiBlast_PDB 59.0741%-102 - C1 -3SOA 3.6 KCC2A_HUMAN
46 HHSearch 58.7946%-113 - C1 -2W4O 5.2 KCC4_HUMAN
45 HHSearch 58.7540%-104 - C1 -3MWU 7.6 ?
13 PsiBlast_PDB 57.3846%-122 - C1 -2VN9 7.0 KCC2D_HUMAN
16 PsiBlast_PDB 57.0741%-109 - C1 -3BHH 4.6 KCC2B_HUMAN
11 PsiBlast_PDB 56.4646%-121 - C1 -2WEL 5.7 KCC2D_HUMAN
20 PsiBlast_PDB 53.2944%-125 - C1 -2YIR 9.0 CHK2_HUMAN
18 PsiBlast_PDB 53.1744%-129 - C1 -2W0J 7.4 CHK2_HUMAN
17 PsiBlast_PDB 51.6144%-118 - C1 -2YCF 7.8 CHK2_HUMAN
8 PsiBlast_PDB 51.0347%-113 - C1 -3HZT 6.4 ?
19 PsiBlast_PDB 50.0944%-126 - C1 -2YIQ 7.3 CHK2_HUMAN