@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_KCC2A_: (2014-08-17 )
MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSGGKSGGNKKSDGVKESSESTNTTIEDEDTKVRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKWQIVHFHRSGAPSVLPH

Atome Classification :

(13 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




3AM_A_3(3C0G)
CSKP_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




AMP_A_3(3C0H)
CSKP_HUMAN
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




1 PsiBlast_PDB 91.5893%-102 - C1 -3SOA 4.7 KCC2A_HUMAN
5 PsiBlast_PDB 73.6992%-116 - C1 -2VN9 7.1 KCC2D_HUMAN
2 PsiBlast_PDB 73.2390%-125 - C1 -2WEL 6.0 KCC2D_HUMAN
23 PsiBlast_CBE 71.4690%-118 - C1 -3BHH 6.4 KCC2B_HUMAN
22 PsiBlast_CBE 71.4192%-115 - C1 -2VN9 7.0 KCC2D_HUMAN
6 PsiBlast_PDB 71.3190%-118 - C1 -3BHH 6.1 KCC2B_HUMAN
4 PsiBlast_PDB 71.2689%-112 - C1 -2V7O 6.7 KCC2G_HUMAN
12 PsiBlast_PDB 60.9747%-106 - C1 -3MFS 5.1 CSKP_HUMAN
17 PsiBlast_PDB 60.7546%-107 - C1 -3C0H 4.2 CSKP_HUMAN
14 PsiBlast_PDB 60.5447%-104 - C1 -3MFU 4.5 CSKP_HUMAN
11 PsiBlast_PDB 60.4047%-103 - C1 -3MFR 4.0 CSKP_HUMAN
18 PsiBlast_PDB 59.9246%-106 - C1 -3C0I 5.0 CSKP_HUMAN
16 PsiBlast_PDB 58.7446%-103 - C1 -3C0G 4.0 CSKP_HUMAN