@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_KCC2B_: (2014-08-17 )
MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLKGAILTTMLATRNFSVGRQTTAPATMSTAASGTTMGLVEQAKSLLNKKADGVKPQTNSTKNSAAATSPKGTLPPAALEPQTTVIHNPVDGIKESSDSANTTIEDEDAKAPRVPDILSSVRRGSGAPEAEGPLPCPSPAPFSPLPAPSPRISDILNSVRRGSGTPEAEGPLSAGPPPCLSPALLGPLSSPSPRISDILNSVRRGSGTPEAEGPSPVGPPPCPSPTIPGPLPTPSRKQEIIKTTEQLIEAVNNGDFEAYAKICDPGLTSFEPEALGNLVEGMDFHRFYFENLLAKNSKPIHTTILNPHVHVIGEDAACIAYIRLTQYIDGQGRPRTSQSEETRVWHRRDGKWQNVHFHCSGAPVAPLQ

Atome Classification :

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]



GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]



5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]



ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]



5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]



ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]



K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]



3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]



3AM_A_3(3C0G)
CSKP_HUMAN
[Raw transfer]



AMP_A_3(3C0H)
CSKP_HUMAN
[Raw transfer]



ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]



DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]



EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]



EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]
1 PsiBlast_PDB 78.5499%-119 - C1 -3BHH 6.4 KCC2B_HUMAN
21 PsiBlast_CBE 77.7199%-119 - C1 -3BHH 6.1 KCC2B_HUMAN
5 PsiBlast_PDB 77.4592%-117 - C1 -2VN9 5.8 KCC2D_HUMAN
3 PsiBlast_PDB 75.6184%-126 - C1 -2WEL 5.5 KCC2D_HUMAN
22 PsiBlast_CBE 75.3492%-116 - C1 -2VN9 5.5 KCC2D_HUMAN
2 PsiBlast_PDB 74.6491%-112 - C1 -2V7O 5.2 KCC2G_HUMAN
11 PsiBlast_PDB 62.8648%-103 - C1 -3MFS 5.3 CSKP_HUMAN
13 PsiBlast_PDB 62.4348%-102 - C1 -3MFU 4.7 CSKP_HUMAN
10 PsiBlast_PDB 62.1748%-101 - C1 -3MFR 4.2 CSKP_HUMAN
15 PsiBlast_PDB 61.6446%-103 - C1 -3C0G 4.2 CSKP_HUMAN
16 PsiBlast_PDB 61.6046%-106 - C1 -3C0H 4.1 CSKP_HUMAN
17 PsiBlast_PDB 60.7646%-105 - C1 -3C0I 4.9 CSKP_HUMAN