@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_KKCC2_: (2014-08-17 )
MSSCVSSQPSSNRAAPQDELGGRGSSSSESQKPCEALRGLSSLSIHLGMESFIVVTECEPGCAVDLGLARDRPLEADGQEVPLDTSGSQARPHLSGRKLSLQERSQGGLAAGGSLDMNGRCICPSLPYSPVSSPQSSPRLPRRPTVESHHVSITGMQDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTRHGAEPLPSEDENCTLVEVTEEEVENSVKHIPSLATVILVKTMIRKRSFGNPFEGSRREERSLSAPGNLLTKKPTRECESLSELKEARQRRQPPGHRPAPRGGGGSALVRGSPCVESCWAPAPGSPARMHPLRPEEAMEPE

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

609_A_2(2ZV2)
KKCC2_HUMAN
[Raw transfer]




ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




ANP_A_7(1CDK)
KAPCA_PIG
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]




WTI_A_2(2WTI)
CHK2_HUMAN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




07U_A_2(3TXO)

[Raw transfer]




DBQ_A_4(2CN8)
CHK2_HUMAN
[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




VGM_A_2(2WTC)
CHK2_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




ODO_A_4(4BDB)
CHK2_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




1 PsiBlast_PDB 85.93100%-116 - C1 -2ZV2 8.0 KKCC2_HUMAN
7 PsiBlast_PDB 64.9832% -99 - C1 -2VN9 5.8 KCC2D_HUMAN
32 HHSearch 63.7232%-106 - C1 -4GV1 6.6 AKT1_HUMAN
46 HHSearch 60.4936%-102 - C1 -1RDQ 6.6 KAPCA_MOUSE
6 PsiBlast_PDB 57.7832%-101 - C1 -2WEL 5.6 KCC2D_HUMAN
40 HHSearch 56.3832%-102 - C1 -3C0I 4.9 CSKP_HUMAN
37 HHSearch 55.4831% -97 - C1 -1XJD 6.5
12 PsiBlast_PDB 49.5631% -95 - C1 -2WTI 6.1 CHK2_HUMAN
36 HHSearch 49.3033% -99 - C1 -3TXO 6.2
9 PsiBlast_PDB 46.3931% -97 - C1 -2CN8 4.3 CHK2_HUMAN
20 PsiBlast_PDB 46.2531%-100 - C1 -4BDB 3.4 CHK2_HUMAN
14 PsiBlast_PDB 45.7431% -92 - C1 -2XM9 6.2 CHK2_HUMAN
10 PsiBlast_PDB 42.6031% -95 - C1 -2WTC 4.2 CHK2_HUMAN
19 PsiBlast_PDB 42.1531% -98 - C1 -4BDA - CHK2_HUMAN