@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_KPCD2_: (2014-08-17 )
MATAPSYPAGLPGSPGPGSPPPPGGLELQSPPPLLPQIPAPGSGVSFHIQIGLTREFVLLPAASELAHVKQLACSIVDQKFPECGFYGLYDKILLFKHDPTSANLLQLVRSSGDIQEGDLVEVVLSASATFEDFQIRPHALTVHSYRAPAFCDHCGEMLFGLVRQGLKCDGCGLNYHKRCAFSIPNNCSGARKRRLSSTSLASGHSVRLGTSESLPCTAEELSRSTTELLPRRPPSSSSSSSASSYTGRPIELDKMLLSKVKVPHTFLIHSYTRPTVCQACKKLLKGLFRQGLQCKDCKFNCHKRCATRVPNDCLGEALINGDVPMEEATDFSEADKSALMDESEDSGVIPGSHSENALHASEEEEGEGGKAQSSLGYIPLMRVVQSVRHTTRKSSTTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALMPVILQDAPSAPGHAPHRQASLSISVSNSQIQENVDIATVYQIFPDEVLGSGQFGVVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQSLRHPGIVNLECMFETPEKVFVVMEKLHGDMLEMILSSEKGRLPERLTKFLITQILVALRHLHFKNIVHCDLKPENVLLASADPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLLNQGYNRSLDMWSVGVIMYVSLSGTFPFNEDEDINDQIQNAAFMYPASPWSHISAGAIDLINNLLQVKMRKRYSVDKSLSHPWLQEYQTWLDLRELEGKMGERYITHESDDVRWEQFAAEHPLPGSGLPTDRDLGGACPPQDHDMQGLAERISVL

Atome Classification :

(9 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_6(2CN5)
CHK2_HUMAN
[Raw transfer]




ANP_A_8(3Q5I)
?
[Raw transfer]




ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]




ANP_A_7(3LIJ)
?
[Raw transfer]




ANP_A_7(3PFQ)
KPCB_RAT
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]




A9T_A_2(4A9T)
CHK2_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




0R4_A_2(4EJN)
AKT1_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




30 HHSearch 64.4436%-107 - C1 -3C0I 4.5 CSKP_HUMAN
43 HHSearch 63.1834%-115 - C1 -3Q5I 4.1 ?
38 HHSearch 61.2635%-115 * C1 *3LIJ 3.9 ?
2 PsiBlast_PDB 56.9137%-112 - C1 -2CN5 6.2 CHK2_HUMAN
47 HHSearch 55.9433%-105 - C1 -4BGQ 7.5 CDKL5_HUMAN
44 HHSearch 55.8734%-101 - C1 -3SOA 3.7 KCC2A_HUMAN
16 PsiBlast_PDB 55.2637%-106 - C1 -2JAM 2.0 KCC1G_HUMAN
4 PsiBlast_PDB 53.1937%-105 - C1 -4A9T 6.0 CHK2_HUMAN
3 PsiBlast_PDB 53.1637%-109 - C1 -2XM9 7.7 CHK2_HUMAN