@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_KPCD3_: (2014-08-17 )
MSANNSPPSAQKSVLPTAIPAVLPAASPCSSPKTGLSARLSNGSFSAPSLTNSRGSVHTVSFLLQIGLTRESVTIEAQELSLSAVKDLVCSIVYQKFPECGFFGMYDKILLFRHDMNSENILQLITSADEIHEGDLVEVVLSALATVEDFQIRPHTLYVHSYKAPTFCDYCGEMLWGLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRKRRLSNVSLPGPGLSVPRPLQPEYVALPSEESHVHQEPSKRIPSWSGRPIWMEKMVMCRVKVPHTFAVHSYTRPTICQYCKRLLKGLFRQGMQCKDCKFNCHKRCASKVPRDCLGEVTFNGEPSSLGTDTDIPMDIDNNDINSDSSRGLDDTEEPSPPEDKMFFLDPSDLDVERDEEAVKTISPSTSNNIPLMRVVQSIKHTKRKSSTMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMPVTPQASVCTSPGQGKDHKDLSTSISVSNCQIQENVDISTVYQIFADEVLGSGQFGIVYGGKHRKTGRDVAIKVIDKMRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKSRLPERITKFMVTQILVALRNLHFKNIVHCDLKPENVLLASAEPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRSKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWREISGEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLREFETRIGERYITHESDDARWEIHAYTHNLVYPKHFIMAPNPDDMEEDP

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]



ADP_A_6(2CN5)
CHK2_HUMAN
[Raw transfer]



ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]



ANP_A_8(3Q5I)
?
[Raw transfer]



ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



ANP_A_7(3LIJ)
?
[Raw transfer]



ANP_A_7(3PFQ)
KPCB_RAT
[Raw transfer]



38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]



P3J_A_2(4BDG)
CHK2_HUMAN
[Raw transfer]



LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]



3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]



A9T_A_2(4A9T)
CHK2_HUMAN
[Raw transfer]



DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]



HCW_A_2(2YCR)
CHK2_HUMAN
[Raw transfer]



NXP_A_2(2YCS)
CHK2_HUMAN
[Raw transfer]



EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]
45 HHSearch 65.7834%-112 - C1 -3Q5I 4.1 ?
30 HHSearch 64.5735%-100 - C1 -3C0I 4.5 CSKP_HUMAN
18 PsiBlast_PDB 64.3334%-115 - C1 -4FG7 4.6 KCC1A_HUMAN
39 HHSearch 63.2034%-108 - C1 -3LIJ 3.9 ?
20 PsiBlast_PDB 61.3234%-118 - C1 -4FG8 5.7 KCC1A_HUMAN
9 PsiBlast_PDB 60.3739%-106 - C1 -2CN5 6.2 CHK2_HUMAN
7 PsiBlast_PDB 60.0339%-106 - C1 -2YCS 6.3 CHK2_HUMAN
2 PsiBlast_PDB 59.8639%-107 - C1 -2YCR 6.4 CHK2_HUMAN
12 PsiBlast_PDB 58.9739%-110 - C1 -4BDG 3.5 CHK2_HUMAN
11 PsiBlast_PDB 57.2439% -99 - C1 -4A9T 6.0 CHK2_HUMAN
10 PsiBlast_PDB 57.1839%-104 - C1 -2XM9 7.7 CHK2_HUMAN
16 PsiBlast_PDB 56.6437%-105 - C1 -2JAM 2.0 KCC1G_HUMAN
48 HHSearch 56.3931% -96 - C1 -4BGQ 7.5 CDKL5_HUMAN
17 PsiBlast_PDB 54.1637%-105 - C1 -2W4O 5.4 KCC4_HUMAN