@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_M3K5_H: (2014-08-17 )
MSTEADEGITFSVPPFAPSGFCTIPEGGICRRGGAAAVGEGEEHQLPPPPPGSFWNVESAAAPGIGCPAATSSSSATRGRGSSVGGGSRRTTVAYVINEASQGQLVVAESEALQSLREACETVGATLETLHFGKLDFGETTVLDRFYNADIAVVEMSDAFRQPSLFYHLGVRESFSMANNIILYCDTNSDSLQSLKEIICQKNTMCTGNYTFVPYMITPHNKVYCCDSSFMKGLTELMQPNFELLLGPICLPLVDRFIQLLKVAQASSSQYFRESILNDIRKARNLYTGKELAAELARIRQRVDNIEVLTADIVINLLLSYRDIQDYDSIVKLVETLEKLPTFDLASHHHVKFHYAFALNRRNLPGDRAKALDIMIPMVQSEGQVASDMYCLVGRIYKDMFLDSNFTDTESRDHGASWFKKAFESEPTLQSGINYAVLLLAAGHQFESSFELRKVGVKLSSLLGKKGNLEKLQSYWEVGFFLGASVLANDHMRVIQASEKLFKLKTPAWYLKSIVETILIYKHFVKLTTEQPVAKQELVDFWMDFLVEATKTDVTVVRFPVLILEPTKIYQPSYLSINNEVEEKTISIWHVLPDDKKGIHEWNFSASSVRGVSISKFEERCCFLYVLHNSDDFQIYFCTELHCKKFFEMVNTITEEKGRSTEEGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQPKLSALSAGSNEYLRSISLPVPVLVEDTSSSSEYGSVSPDTELKVDPFSFK

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IE4_A_3(4BIC)
M3K5_HUMAN
[Raw transfer]



IE8_A_4(4BID)
M3K5_HUMAN
[Raw transfer]



IE4_A_4(4BIC)

[Raw transfer]



IE8_B_6(4BID)

[Raw transfer]



STU_A_3(2CLQ)
M3K5_HUMAN
[Raw transfer]



IE6_B_6(4BIE)

[Raw transfer]



ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



IE6_A_4(4BIE)
M3K5_HUMAN
[Raw transfer]



STU_B_5(4BF2)

[Raw transfer]



IEO_A_3(4BIB)
M3K5_HUMAN
[Raw transfer]



IEO_B_8(4BIB)

[Raw transfer]



STU_B_4(2CLQ)

[Raw transfer]



STU_A_3(4BF2)
M3K5_HUMAN
[Raw transfer]



BH9_B_5(4BHN)

[Raw transfer]



GOL_C_3(1ZY4)
GCN2_YEAST
[Raw transfer]



0WB_A_2(4G3F)

[Raw transfer]



YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]



2OL_A_3(4O0T)
?
[Raw transfer]



S25_A_3(3TKI)
CHK1_HUMAN
[Raw transfer]



ATP_A_2(3Q53)
PAK1_HUMAN
[Raw transfer]



EDO_A_5(2W5A)
NEK2_HUMAN
[Raw transfer]
3 PsiBlast_PDB 85.3499% -75 - C1 -4BID 8.6 M3K5_HUMAN
23 PsiBlast_CBE 84.2999% -74 - C1 -4BIC 5.3
21 PsiBlast_CBE 84.2499% -74 - C1 -4BIE 5.9
6 PsiBlast_PDB 84.24100% -67 - C1 -2CLQ 9.1 M3K5_HUMAN
22 PsiBlast_CBE 84.0299% -74 - C1 -4BID 8.5
24 PsiBlast_CBE 83.7699% -74 - C1 -4BIB 5.9
2 PsiBlast_PDB 83.5999% -71 - C1 -4BIC 5.3 M3K5_HUMAN
27 PsiBlast_CBE 83.27100% -72 - C1 -2CLQ 9.2
4 PsiBlast_PDB 83.1899% -69 - C1 -4BIE 5.8 M3K5_HUMAN
25 PsiBlast_CBE 81.3099% -71 - C1 -4BHN 7.3
26 PsiBlast_CBE 81.0899% -74 - C1 -4BF2 9.3
1 PsiBlast_PDB 81.0299% -69 - C1 -4BIB 6.0 M3K5_HUMAN
5 PsiBlast_PDB 79.2799% -69 - C1 -4BF2 9.0 M3K5_HUMAN
15 PsiBlast_PDB 48.2231% -48 - C1 -3Q53 3.4 PAK1_HUMAN
17 PsiBlast_PDB 47.2031% -44 - C1 -4O0T 7.2 ?
55 HHSearch 37.9131% -43 - C1 -4G3F 7.2
42 HHSearch 22.4230% -52 - C1 -1ZY4 2.9 GCN2_YEAST