@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_MAPK2_: (2014-08-17 )
MLSGSPGQTPPAPFPSPPPPAPAQPPPPFPQFHVKSGLQIRKNAITDDYKVTSQVLGLGINGKVLRIFDKRTQQKFALKMLQDCPKARREVELHWRASQCPHIVHIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLLLKRRKKARAVEDAALAH

Atome Classification :

(11 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_2(1NY3)
MAPK2_HUMAN
[Raw transfer]




L8I_A_2(3M2W)
MAPK2_HUMAN
[Raw transfer]




P4O_A_2(3FHR)
MAPK3_HUMAN
[Raw transfer]




ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]




STU_A_7(1NXK)
MAPK2_HUMAN
[Raw transfer]




B98_X_2(3FYK)
MAPK2_HUMAN
[Raw transfer]




B97_X_2(3FYJ)
MAPK2_HUMAN
[Raw transfer]




ANP_A_8(3Q5I)
?
[Raw transfer]




ANP_A_7(3LIJ)
?
[Raw transfer]




F10_X_2(2P3G)
MAPK2_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]




6 PsiBlast_CBE 83.1598%-115 - C1 -3FYK 5.0 MAPK2_HUMAN
8 PsiBlast_CBE 80.9698%-113 - C1 -2P3G 6.1 MAPK2_HUMAN
3 PsiBlast_CBE 80.3297%-121 - C1 -1NY3 4.7 MAPK2_HUMAN
61 HHSearch 79.8198%-114 - C1 -1NXK 8.0 MAPK2_HUMAN
63 HHSearch 78.7698%-105 - C1 -3M2W 7.8 MAPK2_HUMAN
7 PsiBlast_CBE 78.0498%-107 - C1 -3FYJ 7.3 MAPK2_HUMAN
62 HHSearch 74.2477%-107 - C1 -3FHR 8.5 MAPK3_HUMAN
71 HHSearch 56.1738%-118 * C1 *3LIJ 4.1 ?
79 HHSearch 56.0937%-116 - C1 -3Q5I 4.2 ?
78 HHSearch 52.7040%-125 - C1 -2W4O 5.0 KCC4_HUMAN
81 HHSearch 45.9331%-114 - C1 -2X4F 6.1 MYLK4_HUMAN